Pairwise Alignments

Query, 171 a.a., RNA polymerase sigma factor from Magnetospirillum magneticum AMB-1

Subject, 173 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score = 53.5 bits (127), Expect = 2e-12
 Identities = 44/137 (32%), Positives = 65/137 (47%), Gaps = 7/137 (5%)

Query: 37  DQDPEDILSDVVLGLLERADLLAEVENLTAYLLTAMVNRVRDLFRR---RRDLPMPEAMP 93
           + D ED++ D ++     AD       L  +L + + N      RR   R          
Sbjct: 26  ESDAEDLVQDALVRAYANADSYQRGRPLRVWLFSILHNVFVSGTRRAAVRERFRADAVAQ 85

Query: 94  AEPSQPAGVEERLELTR---ALSLLSTAEQAVWLAVEMEGFAFVELAEAWGEPLGTLLSR 150
           AEP      E+ + L +   AL+ L   +Q V   V +EG ++ + A+A G P+GTL+SR
Sbjct: 86  AEPVAAPAQEQMVRLHQIEAALTALPEEQQTVLHLVAVEGLSYQDAADAIGIPIGTLISR 145

Query: 151 KSRATRRLRKALEETPS 167
            SRA  +LR ALEE  S
Sbjct: 146 LSRARAKLR-ALEEGAS 161