Pairwise Alignments

Query, 576 a.a., chemotaxis protein from Magnetospirillum magneticum AMB-1

Subject, 664 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  100 bits (248), Expect = 2e-25
 Identities = 84/299 (28%), Positives = 137/299 (45%), Gaps = 39/299 (13%)

Query: 132 ETGGIGKQM----IEIAEDIDEVATKVADQHALLAELQQG--------IRALSDANQRIV 179
           E G IG  +    + +   I EV        + L +LQ+         +R  S+ +Q + 
Sbjct: 366 ELGAIGHSVNRFIVYLQNMIGEVTQATGAMSSSLEQLQRTSAHTNQILVRHASETDQTVT 425

Query: 180 AAME-------------ETLAGATAASAEAETSRQRVRGSLGDIDEVVRMVTDGRGLLLD 226
           A  E             ET A    A+  A+ SR  V  +   +  ++  V+     + +
Sbjct: 426 AITEMSSTADTVAQNAAETAAFTQRANEHADRSRVVVGEASNSVSALIGEVSSATHSVEN 485

Query: 227 LQDAMGNVVGVAQGIGHIARQTNLLALNATIEAARAGEHGKGFAVVAGEVKELSRRAGSA 286
           ++     +      IG IA QTNLLALNA IEAARAGE G+GFAVVA EV+ L+ R  ++
Sbjct: 486 MRQDAARITETLGVIGAIAGQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQAS 545

Query: 287 SAEIRQTLEGLTGTAGKLVEQGDHSATKAGGLTAETAAIADTMDHIRTSLAEMAG---RV 343
           +++I + L  LT      V   +++        A   + AD    + T L EMAG    +
Sbjct: 546 TSQINEMLTRLTAGVSSSVAAMENT-------QASCQSAADATARVNTGLDEMAGSVSHI 598

Query: 344 ENVAADASSIHDRSSGLSAEIDQAAEALAEFRTRL----DATRSRLQDLLDAGERLVVL 398
            N++   ++  ++ S ++ EI+++   + +    L     AT +  Q LLDA  R++ L
Sbjct: 599 NNLSTQIATAAEQQSAVTEEINRSMVQIRQMVEELVQSGHATETNTQSLLDANGRVIAL 657



 Score = 29.6 bits (65), Expect = 4e-04
 Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 3/87 (3%)

Query: 130 ARETGGIGKQMIEIAEDIDEVATKVADQHALLAELQQGIRALSDANQRIVAAMEETLA-- 187
           A E    G+Q    A   DEV    A   A  +++ + +  L+      VAAME T A  
Sbjct: 515 AIEAARAGEQGRGFAVVADEVRALAARTQASTSQINEMLTRLTAGVSSSVAAMENTQASC 574

Query: 188 -GATAASAEAETSRQRVRGSLGDIDEV 213
             A  A+A   T    + GS+  I+ +
Sbjct: 575 QSAADATARVNTGLDEMAGSVSHINNL 601