Pairwise Alignments

Query, 323 a.a., two-component sensor histidine kinase from Magnetospirillum magneticum AMB-1

Subject, 626 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  145 bits (366), Expect = 3e-39
 Identities = 86/237 (36%), Positives = 128/237 (54%), Gaps = 8/237 (3%)

Query: 80  DRLRRYVADLERIADVAAHDLQEPLRRMVSYSQLLASHDQAGCDDEVRDYVGHVVDGARR 139
           ++LRR ++DLE +  VAAHDLQEP R + S+ QLL    +    ++   Y+ + V GA R
Sbjct: 397 EKLRRALSDLEMVTTVAAHDLQEPARTIASFLQLLELRYRGKLGEDADQYIAYAVAGAHR 456

Query: 140 MRALVSGLREFVAVDSLPRTGEVSSAWVAMTVARQRLADKLADAGVTLVVDPLPEVEADP 199
           MR  ++GL+E+  VD  P       A   +    +    KL +AG  + +  LP V+A+P
Sbjct: 457 MRDQLAGLQEYTLVDQGPAFFPPVDAAEIVAAILEAWKPKLDEAGAVVSLGSLPVVQANP 516

Query: 200 ASLVEIFVQLLDNAARYRAPGRRPVVHVSVVRDGDMAKFQVCDNGMGIDPARVVRMFEIF 259
             L  +F  L+ NA ++R P R P + +S    G   +F V DNG+G++ A   ++F +F
Sbjct: 517 DQLKALFQHLIGNALKFRHPDRPPEIRLSAAHQGGTWEFSVTDNGIGVEEAYWDKIFMVF 576

Query: 260 YRPHGGDGRAAPGVGTGLAVVRRLVERLGGAVWVESENGVGSTFGFSLRLGLSLPDR 316
            R H        G G GLA+ R++VER GG + V S    GSTF F      ++PDR
Sbjct: 577 QRLH--PLSLYEGTGIGLAICRKIVERHGGRIRVVSVPNQGSTFSF------TIPDR 625