Pairwise Alignments

Query, 764 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Magnetospirillum magneticum AMB-1

Subject, 854 a.a., protein disaggregation chaperone from Pseudomonas simiae WCS417

 Score =  320 bits (819), Expect = 3e-91
 Identities = 185/422 (43%), Positives = 262/422 (62%), Gaps = 22/422 (5%)

Query: 2   LSRNLEQSLHRALSHATERRHEYATLEHLLLALTDDQDAVA--VLRACNVDVDKLKRDLG 59
           L+  L+ +L  + S A    H      HL+ AL + Q      +L     DV+ L+++L 
Sbjct: 6   LTSKLQLALSDSQSLAVGLDHPAIEPAHLMQALLEQQGGSIKPLLMQVGFDVNSLRKELS 65

Query: 60  EFIDTNLSELVSPRGTDPKPTAGFQRVVQRAAIHVQSSGREEVTGANVIVALFSERESHA 119
           + +D  L ++ +P G D   +    R++ +A    Q  G + ++   V++A   E     
Sbjct: 66  KELD-QLPKIQNPTG-DVNMSQDLARLLNQADRLAQQKGDQFISSELVLLAAMDENSKLG 123

Query: 120 VYFLQSQDMTRLDAVNYISHGVAKAPGRGQNRTVHGADDEANPDKVVKKGQEALNAYCIN 179
              L                GV+K         + G D   +P+   ++ ++AL+ Y ++
Sbjct: 124 KLLL--------------GQGVSKKALENAINNLRGGDAVNDPNH--EESRQALDKYTVD 167

Query: 180 LNKKAAQGKIDPLIGRDEEIDRTIQILCRRSKNNPLYVGDPGVGKTAIAEGLARRIVNGE 239
           L K+A +GK+DP+IGRD+EI RTIQ+L RR+KNNP+ +G+PGVGKTAIAEGLA+RI+NGE
Sbjct: 168 LTKRAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGE 227

Query: 240 VPDVLKNATIFALDMGSLLAGTRYRGDFEERLKAVVTELENYDG-AVMFIDEIHTVIGAG 298
           VPD LK   + +LDMGSL+AG ++RG+FEERLK+++ EL   +G  ++FIDE+HT++GAG
Sbjct: 228 VPDGLKGKRLLSLDMGSLIAGAKFRGEFEERLKSLLNELSKQEGQIILFIDELHTMVGAG 287

Query: 299 ATSGGSMDASNLLKPALASGSLRCIGSTTYKEFRNHFEKDRALVRRFQKIDVNEPSIPDT 358
               GSMDA N+LKPALA G L C+G+TT  E+R + EKD AL RRFQK+ V EPS  DT
Sbjct: 288 -KGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQKVLVEEPSEEDT 346

Query: 359 IKILNGIKTYYESHHKVRYTAEAIKAAVELSAKYITDRKLPDKAIDVIDEVGASRMLLPE 418
           I IL G+K  YE HHKV  T  AI AA +LS +YITDR+LPDKAID+IDE  +   +  +
Sbjct: 347 IAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLIDEAASRIRMEID 406

Query: 419 SK 420
           SK
Sbjct: 407 SK 408



 Score =  273 bits (698), Expect = 3e-77
 Identities = 157/420 (37%), Positives = 250/420 (59%), Gaps = 15/420 (3%)

Query: 336 EKDRALVRRFQKIDVN----EPSIPDTIKILNGIKTYYESHHKVRYTAEAIKAAVELSAK 391
           E+D A  +R +K+       E    D  +I    K   +   +++   E  +  +E + +
Sbjct: 432 EEDDAAKKRLEKLQEEIVRLEREYSDLEEIWTSEKAEVQGSAQIQQKIEQSRQELEAARR 491

Query: 392 YITDRKLPDKAIDVIDEVGASRMLL-----PESKR-RKTVTVRDVEEIVAKIARIPPKSV 445
                ++ +    VI ++  S  ++     PE++  R  VT  ++ E+V+K   IP   +
Sbjct: 492 KGDLNRMAELQYGVIPDLERSLQMVDQHGKPENQLLRSKVTEEEIAEVVSKWTGIPVSKM 551

Query: 446 STNDVEALRNLERDLKTLVFGQDKAIEALASAIKLARAGLREPEKPIGCYLFSGPTGVGK 505
              + + L  +E  L   V GQ++A+ A+++A++ +RAGL +P +P G ++F GPTGVGK
Sbjct: 552 LEGERDKLLKMESLLHQRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGK 611

Query: 506 TEVARQLAKIM---GIELTRFDMSEYMERHSVSRLIGAPPGYVGFDQGGLLTDAIDQHPH 562
           TE+ + LA+ +      + R DMSE+ME+HSV+RLIGAPPGYVG+++GG LT+A+ + P+
Sbjct: 612 TELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPY 671

Query: 563 SVLLLDEIEKAHPDLFNILLQVMDHGRLTDHNGKTVDFRNVILIMTTNAGAADLAKSAIG 622
           SV+LLDE+EKAHPD+FNILLQV++ GRLTD +G+TVDFRN +++MT+N G+A + +  +G
Sbjct: 672 SVILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQI-QELVG 730

Query: 623 FGRETREGDDTDAINRMFSPEFRNRLDSTIAFANLTPEIVAQVVDKFVMQLETQLGDRDV 682
             RE +     DA+   F PEF NR+D  + F  L  + +A + +  + +L  +L +R++
Sbjct: 731 -DREGQRAAVMDALTSHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRGRLAEREL 789

Query: 683 TIELTDEARAWLAKKGYDRSFGARPLARVIQEHIKKALAEELLFGRLSKGGIVRVRVGED 742
            + L+ EA   L   GYD  +GARPL R IQ  I+  LA+ +L G    G  V   V  D
Sbjct: 790 DLVLSSEALDKLIAVGYDPVYGARPLKRAIQRWIENPLAQLILSGSFMPGTSVEATVEND 849