Pairwise Alignments

Query, 499 a.a., carbohydrate porin from Magnetospirillum magneticum AMB-1

Subject, 421 a.a., porin from Pseudomonas simiae WCS417

 Score =  116 bits (290), Expect = 2e-30
 Identities = 115/401 (28%), Positives = 166/401 (41%), Gaps = 37/401 (9%)

Query: 77  TALGSFGGARTELCKKGVQLGVTSVNEMLANPYGGVSHGGKGQGRMQFDLDIDLEKMAEL 136
           T  G +GG R EL  +G++       E   N +GG     +    ++  +  DL K+   
Sbjct: 30  TLTGDWGGLRHELDAQGIRFTGEYSGETAYNAHGGQHRSARYSQNLKLGVQFDLGKLYGF 89

Query: 137 K-GTTLHAGAMWIYGGRISGKNLGNLMPVSNIEAIPSRRLFTLWGQQVLFDDMLSVRLGQ 195
             G  +        G   S   +GN +P+         RL  L  ++ LF   L+V+LG 
Sbjct: 90  NNGDRIQVTLNDRRGNSASEDLVGNRLPIQENYGGLYTRLTELSYERTLFTPALNVKLGY 149

Query: 196 LAVDDEF--VVSKLSSVFVNSTF-GFPFGISGNLPSGGAAFPMPTPGARVKLNLTDEVSW 252
           +A+ ++   + S +   F+N+ F G P  +SG   SG   +P    GARVK +       
Sbjct: 150 MAMGNDLGGLDSGILCNFMNAGFCGHPLNMSGG--SGWTNYPNAHLGARVKYDFAPNWQL 207

Query: 253 MTAAFAGDPAGKFDVRDPQWRNHDGTTFSFSRGTFYITEGAYAVNQEKNSKGLPGTYKLG 312
             AAF  DP    +           TT     GT    E  Y     K++  LPG YKLG
Sbjct: 208 RVAAFNVDPQSNGNSSRAWHLGPKHTT-----GTVVPIELVY-----KHAGSLPGEYKLG 257

Query: 313 AWYHSARFNDQHFDNLGQSLASGNTTGIGNPVRGNGGVYFVIDQMLIKGQRWSEEGLGVF 372
            +Y S+                    G    V G GG Y +IDQ +   +  +   L  F
Sbjct: 258 YYYDSSDVK---------------RIGSNKEVSGRGGHYLLIDQAVWASESSAGRVLHAF 302

Query: 373 LRGGVSPSDRNQVPF---YLDGGISYKGLFAGREEDTLALGVGYGQLSGSLQGLDRDTRQ 429
             G  S +     PF   Y  G + YK  F GR  DTLALG G    +   + +      
Sbjct: 303 --GQYSAASEAASPFSKWYGAGVVLYKP-FEGRPRDTLALGYGRAVPNPRSREVQELAAL 359

Query: 430 INGQPTRPVRDYETVIEVTYQAQITPWWTIQPDVQYVIHPG 470
             G     + + E +IE++Y  Q TPW T++PDVQY+I PG
Sbjct: 360 NAGNDYPNLNNAEQLIELSYGYQATPWLTLRPDVQYIIEPG 400