Pairwise Alignments

Query, 499 a.a., carbohydrate porin from Magnetospirillum magneticum AMB-1

Subject, 447 a.a., carbohydrate-selective porin from Pseudomonas putida KT2440

 Score = 99.4 bits (246), Expect = 2e-25
 Identities = 105/409 (25%), Positives = 160/409 (39%), Gaps = 35/409 (8%)

Query: 80  GSFGGARTELCKKGVQLGVTSVNEMLANPYGGVSHGGKGQGRMQFDLD--IDLEKM---- 133
           G +GG RTEL  KG    +  V E+  N +GG +     +   QF L   +DL+K+    
Sbjct: 39  GDWGGTRTELLDKGYDFTLDYVGEVAGNLHGGYNDDKTARYSDQFALGAHLDLQKILGWH 98

Query: 134 -AELKGTTLHAGAMWIYGGRISGKNLGNLMPVSNIEAIPSR-RLFTLWGQQVLFDDMLSV 191
            AE K          +   RIS    G    V  +       RL  +W +Q  FD  L V
Sbjct: 99  DAEFKLAITERSGRNLSNDRISDPRAGQFSSVQEVWGRGQTWRLTQMWIKQKYFDGALDV 158

Query: 192 RLGQLAVDDEFVVSKLSSVFVNSTFGFPFGISGNLPSGGAAFPMPTP--GARVKLNLTDE 249
           + G+    ++F  +     F N  F    G       GG  +  P      RVK N+T E
Sbjct: 159 KFGRFGEGEDF--NSFPCDFQNLAF---CGSQVGNWVGGIWYNWPVSQWALRVKYNITPE 213

Query: 250 VSWMTAAFAGDPAGKFDVRDPQWRNHDGTTFSFSRGTFYITEGAYAVNQEKNSKGLPGTY 309
                 AF  +P+        +  N    + S ++G     E  ++        GLPG Y
Sbjct: 214 FFVQVGAFEQNPSNL------ETGNGFKLSGSGTKGAILPVEAVWS----PKVNGLPGEY 263

Query: 310 KLGAWYHSARFNDQHFDNLGQSLASGNTTGIGNPVRGNGGVYFVIDQMLIKGQRWS-EEG 368
           +LG +Y +A+ +D + D  G   A    TG       +   ++V+ Q  +         G
Sbjct: 264 RLGYYYSTAKADDVYDDVNGNPQA---LTGEAFKSHSSKHGWWVVAQQQVTAHGGDVNRG 320

Query: 369 LGVFLRGGVSPSDRNQVPFYLDGGISYKGLFAGREEDTLALGVGYGQLS------GSLQG 422
           L +F    V     N V  Y   G+ YKG F  R +D +  GV    ++        L  
Sbjct: 321 LSLFANFTVHDKATNVVDNYQQVGLVYKGAFDARPKDDIGFGVARIHVNDDVKKRAELLN 380

Query: 423 LDRDTRQINGQPTRPVRDYETVIEVTYQAQITPWWTIQPDVQYVIHPGG 471
                   +     P++  E   E+ Y   +T W T++P++QY+  PGG
Sbjct: 381 AQSGINDYDNPGFVPLQRTEYNAELYYGFHVTNWLTVRPNLQYIKSPGG 429