Pairwise Alignments

Query, 655 a.a., PAS domain-containing sensor histidine kinase from Magnetospirillum magneticum AMB-1

Subject, 908 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  136 bits (343), Expect = 4e-36
 Identities = 110/379 (29%), Positives = 179/379 (47%), Gaps = 21/379 (5%)

Query: 279 LAAEQALRTEHSFRKAMEDSLTVGMRARDLEGRITYVNPAFCHMVGWTADELVGTVPPML 338
           LAAE   ++E  +R  +EDS  +  R R  +  +T+ N    + +    ++L G    + 
Sbjct: 543 LAAEHIKQSEERYRILVEDSPAMICRYRP-DLTLTFGNTPLANYLECPPEQLPGL--NLG 599

Query: 339 YWVPEDLEHTYELHRAVMRGEAPAEGFELVFRRKNGERFSALIYEAPLIDSDGRHTGWMA 398
            W+ ++    +      +  E P    E+       E    +  +  + D  G      A
Sbjct: 600 DWLSDEQRQAFAHRIGQLSPEFPVSTAEISLELPGREHAWWVWSDRGVFDEQGALVEVQA 659

Query: 399 SVLDITERKRAEELSRQHQEKLQHTARLITMGEMASTLAHELNQPLSAIASYATGCLNRL 458
              D TE +R+       Q++L  +A++ T+GEMA+ LAHE+NQPL+ +       L RL
Sbjct: 660 VGRDNTEVRRS-------QQQLTQSAKMATLGEMATGLAHEINQPLNVMRMAIVNVLKRL 712

Query: 459 SAGDARPEELVPPLTKLGAQAQRAGQIIRRIHDFVRKSEPLVVPCLLDEIIEGVVGFLEP 518
           S GDA+ + L   L ++  Q QRA +++  +  F R+SE    P    + +EG +  L  
Sbjct: 713 SNGDAQIDYLTEKLQRIDTQVQRAARVVDHMRVFGRRSEIEQQPFDPSQAVEGTLSLLGD 772

Query: 519 DARKRGIRIDLDLSLTPGAARPRVEADHILIEQVILNLVRNAMEAM--GHTPRPQRRLTI 576
             R +G+    D+ +TP     +V+     +EQV++NL+ NA +A+       P+ R  I
Sbjct: 773 GLRGKGV----DVRITPADFTVQVKGHVDQLEQVLINLMVNARDALLSKRQKDPEFRPWI 828

Query: 577 SLQCADGQARIR--VADRGTGIPPEIAANLFSPFFTTKETGM--GMGLNICRSIVEAHRG 632
           ++ C      +R  V D G GI P +   +F PFFTTK  G+  G+GL++   IVE   G
Sbjct: 829 AVHCEHDSRHVRIWVEDNGDGIDPRLLERIFEPFFTTKPIGVGTGLGLSVSYGIVENMGG 888

Query: 633 HLWFEENPGGGSVFLFTLP 651
            L    N   G+ F   LP
Sbjct: 889 RL-SVANAEQGARFCVELP 906