Pairwise Alignments

Query, 337 a.a., C4-dicarboxylate ABC transporter from Magnetospirillum magneticum AMB-1

Subject, 342 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  138 bits (347), Expect = 2e-37
 Identities = 89/328 (27%), Positives = 155/328 (47%), Gaps = 3/328 (0%)

Query: 6   LIAGAIAACVLAGSAMAQQAQPIVIKFSHVVAPDTPKGKGAEYFKKLAEERTKGRVKVEV 65
           LIA A AA V        + Q   ++ S   + D P G       +    ++ G+ K+  
Sbjct: 13  LIAAAAAAAVFTTGLAQAEFQDRTVRISMTGSKDHPAGIALTKTSECLAAKSGGKFKMRP 72

Query: 66  YPNSQLYKDKEEMEALQLGAVQMLAPSLAKFGPLGVKEFEVFDLPYIFPSKDVLRSVTGG 125
           +  + L  ++  +  ++ G++     + A   P  V +  VFDLP++      + ++  G
Sbjct: 73  FFEAVLGPEQANLTQVRSGSLDGAVITTAATAP-AVPQLGVFDLPFLVSDYKEIDALLDG 131

Query: 126 PVGASLLKKLEGKGIIGLAYWDNGFK-IMSANKPIKAPSDLKGVKMRIQSSKVLDAEMRA 184
             G  L       G++ L++W++GF+ + ++ +PI    DL+G+K+R+  +K        
Sbjct: 132 AFGERLAGFYGAAGLVHLSFWEHGFRNVTNSRRPINKLEDLQGLKLRVIQNKTFIDTFTQ 191

Query: 185 LGALPQVMAFSEVYQALQTGVVDGTENPPSNMYTQKMHEVQKHATMTNHGYLGYAVIVNK 244
           LGA P  M F+EVY AL+T  +DG ENP + + T K++EVQKH  +T H Y     I +K
Sbjct: 192 LGANPVPMPFTEVYSALETKAIDGQENPVAFLQTSKLYEVQKHVALTRHVYSPVNFIYSK 251

Query: 245 KFWEGLPADIRATLEGAMSEASVFANAIAQTENDDAVKAMKASGKTEFHDPSAAEIEAWR 304
             ++ L  D +  L+    E  +    + +   D +   +K  G     +PS AE+E  R
Sbjct: 252 TQYDKLAPDEQKALKDCAMENRLVNRQLGRDMEDKSAAYLKTQG-VAITEPSKAELERMR 310

Query: 305 KALLPVHKDMEGRVGKDLIESFYKEAAK 332
           +    V+ +    +G DLI +   E  K
Sbjct: 311 EKTKVVYANQTAVLGPDLINALNAEVKK 338