Pairwise Alignments

Query, 427 a.a., C4-dicarboxylate ABC transporter permease from Magnetospirillum magneticum AMB-1

Subject, 429 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  286 bits (732), Expect = 8e-82
 Identities = 156/423 (36%), Positives = 254/423 (60%), Gaps = 3/423 (0%)

Query: 6   IFGLL-IVLMLTGMPISISLGLTVLSFLFLFTQVPIESVALKLFTGIEKFEIMAIPFFIL 64
           + GL+ + LM+ G PI+ ++ +  L  ++L   +    V   LF+G++ F +MAIPFFIL
Sbjct: 4   VLGLVFLALMVIGAPIAFAMLIAGLVAVWLKPGLSSLVVMQNLFSGLDSFPLMAIPFFIL 63

Query: 65  AGNFLTHGGVARRMINFATAMVGHWYGGLGLAGVMACALFAAVSGSSPATVVAIGSIILP 124
           A   +T G +   ++ FA  +VG   GGLG A ++    F+ +SGS+ A     G++++ 
Sbjct: 64  AAELMTGGALTDVLLKFAARLVGMRRGGLGHANILTLTFFSGISGSALADAAGPGAMLIK 123

Query: 125 AMVKQGFPNKFGAGVITTSGALGILIPPSLVMVMYAVATNT-SVGALFMAGVIPGLVLAT 183
            M K G+ + + A +  ++  +G +IPPS++M++YA+  N+ S+  LF+AGV+PG ++A 
Sbjct: 124 MMRKAGYKDSYAAALTASTAIVGPIIPPSIIMIVYAMTDNSVSITGLFLAGVVPGFLIAL 183

Query: 184 VLGAVTWYIAWKNDYPRLPPATW-AQRFRAFREAIWGLALIVIVIGGIYTGVFTPTEAAA 242
            L  V   ++ +  Y   P     A   R F  A+  L L VI++GGI+ G+FTPTEA+A
Sbjct: 184 SLMVVNHIVSVRRGYRSSPELLDPAPLLRLFWRALPALMLPVIILGGIHLGIFTPTEASA 243

Query: 243 MSAVYAFLIAVFVYKDMPLKGVGKILLSSASMSAMLLYIITNAVLFSFVLANENIPHAIA 302
            + +YA L+  FVY  + +  +  IL  SA M+A +L+I+  + +F++VL    IP  +A
Sbjct: 244 AAVLYALLVGRFVYGTLRMDMLPAILFRSALMTASILFIVATSAVFAWVLTVGQIPQTMA 303

Query: 303 DWIVGKELGVIAFLLVVNVLLLVAGNFMEPSSIVLIMAPILFPVAMKLGIDPIHFGILIV 362
            WI G  L  I  L+ +NVLLL+ G F+EP   V+IM PIL P+A   G++ +HF I+++
Sbjct: 304 AWIAGMALSPIELLIAINVLLLLVGIFIEPLPGVMIMVPILGPLAEAAGLNSLHFAIVVI 363

Query: 363 VNMEVGMCHPPVGLNLYVASGITKMGITELTVAVWPWLLAMLGFLMVVTYWPPLSIWLPR 422
           VN+ +GM  PPVG  L+V S ++ + +  +   + P L+A+   LM++T+ P  S WLP 
Sbjct: 364 VNLTLGMVTPPVGGLLFVTSAVSGVRMGPMVREMVPMLVALFTVLMLLTFVPAFSTWLPG 423

Query: 423 ALG 425
            LG
Sbjct: 424 VLG 426