Pairwise Alignments

Query, 687 a.a., C4-dicarboxylate ABC transporter from Magnetospirillum magneticum AMB-1

Subject, 425 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score = 79.0 bits (193), Expect = 4e-19
 Identities = 90/415 (21%), Positives = 161/415 (38%), Gaps = 63/415 (15%)

Query: 197 FILFGSFLEQAGMIRLFTDVALGTVGHTKGGPAKVAVVTSGLMGTINGSGIANVVTTGAL 256
           FIL G  +   G+ R   D A+  VGH +GG   VA+V + +M +I+GS  A+     A+
Sbjct: 62  FILAGELMNSGGLSRRIIDFAIALVGHIRGGLGIVAIVAAIIMASISGSAAADTAALAAI 121

Query: 257 TIPLMKRFGYRSEFAGAVEATASMGGQIMPPVMGAVAFIMAETLNISYAEVCKAAAIPAL 316
            IP+M + GY    +G + A   +   ++PP M  + F +A   N+S  ++  A  +P +
Sbjct: 122 LIPMMAKAGYNIPRSGGLIAAGGIIAPVIPPSMAFIVFGVA--ANVSITQLFLAGIVPGI 179

Query: 317 LYYASAI--WMVHLEAGIAGLHGMPKDQCPSAQGA-LRRQWYLMVPLAALVYLLLAGFTP 373
           L   S I  W++ +      +  +PK        A +R  W L +P+  L  +     TP
Sbjct: 180 LMGISLIIAWLIVVRKD--NIKPLPKTSGKERLVATVRAGWALGMPVIILGGIKAGIMTP 237

Query: 374 MFSGTVGLALTAIVILGSSIAANIGGMAGRVVFWGVLGIASSAFFKLGINVVVVTVAVLV 433
             +  V                     AG  +F G+              V+   +    
Sbjct: 238 TEAAVVA--------------------AGYALFVGM--------------VIYRELKPAD 263

Query: 434 GVNFFVRGGRETMRMTVRGLVEGARSAVPVGVACTLVGT-IIGTMTLTGIAGSFTQGLVS 492
             +  +R  + T             S +   V   LV   +I    +      + + L+ 
Sbjct: 264 LFHVLLRAAKST-------------SIIMFLVCAALVSAWLITAANIPNEVAGYIEPLID 310

Query: 493 MSGGSLFLTLILTMIASLILGMGIPTIPTYIITSSLVAPMLFKMGVPLVVSHMYVFYFGI 552
                +   ++L  I    +G  +   PT +I + ++ P++ + G+  V   +       
Sbjct: 311 RPMLLMVAMMVLVFI----VGTALDLTPTILILTPVLMPIVKQAGIDPVYFGVLFIINNA 366

Query: 553 LADLTPPVGLAAFAAASIARSNF--FVTGWWAVRVAMAGFVVPFMAVYDPSLMMV 605
           +  +TPPVG+     + + R        G W   VA    +V  + V  P ++MV
Sbjct: 367 IGLITPPVGVVLNVVSGVGRIPLGKVTIGVWPFLVAET--IVLALLVIFPDIVMV 419



 Score = 28.5 bits (62), Expect = 7e-04
 Identities = 48/205 (23%), Positives = 83/205 (40%), Gaps = 39/205 (19%)

Query: 383 LTAIVILGSSIAANIGGM--AGRVVFWGVLGIASSAFFKLGI---NVVV-VTVAVLVGVN 436
           +T  V +GS + A   G+  A  ++F GV+ +     F   I   N++       L+ + 
Sbjct: 1   MTLFVFVGSLLGAMAIGVPVAFSLMFCGVVLMWYMGMFNTAIIAQNMISGADTFTLLAIP 60

Query: 437 FFVRGGRETMRMTVRGLVEGARSAVPVGVACTLVGTIIGTMTLTGIAGSFTQGLVSMSGG 496
           FF+  G E M         G  S   +  A  LVG I G + +  I  +    + S+SG 
Sbjct: 61  FFILAG-ELMN-------SGGLSRRIIDFAIALVGHIRGGLGIVAIVAAII--MASISGS 110

Query: 497 SLFLTLILTMIASLILGMGIPTIPTYIITSSLVAPMLFKMGVPLVVSHMYVFYFGILADL 556
           +   T  L                     ++++ PM+ K G  +  S   +   GI+A +
Sbjct: 111 AAADTAAL---------------------AAILIPMMAKAGYNIPRSGGLIAAGGIIAPV 149

Query: 557 TPP-VGLAAF-AAASIARSNFFVTG 579
            PP +    F  AA+++ +  F+ G
Sbjct: 150 IPPSMAFIVFGVAANVSITQLFLAG 174