Pairwise Alignments

Query, 306 a.a., molecular chaperone DnaJ from Magnetospirillum magneticum AMB-1

Subject, 319 a.a., Curved DNA-binding protein from Pseudomonas putida KT2440

 Score =  170 bits (430), Expect = 5e-47
 Identities = 110/322 (34%), Positives = 164/322 (50%), Gaps = 30/322 (9%)

Query: 2   KDPYLVLGVARTASDDDIKKAYRALARELHPDLNPGDAKAESRFKDISAAYDFLSDSTKR 61
           KD Y +LGV  TA +  IK AYR LAR+ HPD++  +  AE +FK+ + AY+ L D+ KR
Sbjct: 4   KDYYKILGVEPTADEKAIKAAYRKLARKYHPDVSK-ERDAEEKFKEANEAYEVLGDAQKR 62

Query: 62  AQFDAGEIDATGSPKRGAWRSRPGARPGPGGGGPRGGFGGFGENVDDIMAELFRRKQKAQ 121
           A+FD  EI   G      +++ PG     GGGG  GG      +  D  + +F  +    
Sbjct: 63  AEFD--EIRKYGGQHGRPFQAPPGWESRGGGGGFEGG------DFSDFFSSIFGGRSAGG 114

Query: 122 S------QAHAKARPRGGDVRHTLTISFLDAAAGGTKRVTLM-------------SGRTV 162
           +      Q    A  RG DV   L +   +  +  +K+++               + +T+
Sbjct: 115 NPFGGARQQQRSAGRRGQDVELELAVFLEETLSKESKQISFQVPQTNAMGQRTGFTTKTL 174

Query: 163 EVRIPPGSQDGQTLRLKGQGHGADDGAVPGDAFIEIKVEDHSHFKRRDLDVLLDLPVTVQ 222
            VRIP G  DG+ +RLKGQG     G   GD F+ I++  H  F     D+++ +P+   
Sbjct: 175 NVRIPAGVTDGERIRLKGQGAPGSGGGANGDLFLTIRMAPHPLFDVEGHDLIITVPLAPW 234

Query: 223 EAVLGGKVPVPTIDGKVMVTIPPGSNTGAVLRLKGRGIAGPGNTRGDQLVTLTVVLP--E 280
           EA LG KV VPT+DGK+ +TI P S +G  LR+ G+G+A     RG+    L VV+P   
Sbjct: 235 EAALGAKVAVPTLDGKINLTIRPDSQSGQRLRVPGKGLANKQGERGNLYAQLKVVMPPAS 294

Query: 281 DGEFRQLVEKWGPRHGYDPRAK 302
           D   R+L  K   +  ++PR +
Sbjct: 295 DESARELWTKLSEKAAFNPRTQ 316