Pairwise Alignments

Query, 449 a.a., glycine dehydrogenase from Magnetospirillum magneticum AMB-1

Subject, 946 a.a., Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) from Pseudomonas simiae WCS417

 Score =  198 bits (503), Expect = 7e-55
 Identities = 156/448 (34%), Positives = 220/448 (49%), Gaps = 31/448 (6%)

Query: 2   RYLPLTEADRRAMLDVIGAKSVDDLFRDV-PPSARLAGPLPLPSHQGEMEVERAFTRMAG 60
           R++   + D + ML  +G  S++ L   V P S +    L L     E E       +AG
Sbjct: 14  RHIGPRQEDEQQMLASLGFDSLEALSASVIPESIKGTSVLGLEDGLSEAEALAKIKAIAG 73

Query: 61  KNLSAGCAPFFIGAGVYRHHVPAAVDQLLLRGE-FLTAYTPYQPEVSQGTLQMLFEFQSQ 119
           KN        +IG G Y  H P+ + + LL    + TAYTPYQPE+SQG L+ L  FQ+ 
Sbjct: 74  KNQ---LFKTYIGQGYYNCHTPSPILRNLLENPAWYTAYTPYQPEISQGRLEALLNFQTL 130

Query: 120 VATITGMDVANASMYDGATACAEAAIMACRITKR---NRVIVSGGVHPHYAETLETSLRF 176
           ++ +TG+ +ANAS+ D ATA AEA     R++K    N    S   HP   + L T  R 
Sbjct: 131 ISDLTGLPIANASLLDEATAAAEAMTFCKRLSKNKGSNAFFASIHSHPQTLDVLRT--RA 188

Query: 177 TEMEADVLPPDPLGMEDMIGRVDSKTACVVVQNPGFFGTVRDLRPLAALCHEAGALLVVM 236
             +  DV+  D   + D+     S     ++Q P   G V D R L    H A  L+ V 
Sbjct: 189 EPLGIDVVVGDERELTDV-----SPFFGALLQYPASNGDVFDYRELTERFHAAHGLVAV- 242

Query: 237 VAEPTSLGLIESPGAMGADIVVCEGQSLGMGLNFGGPGLGLFATRDKYVRQMPGRLVGQT 296
            A+  +L L+  PG  GAD+ +   Q  G+ L FGGP    F+T+D + R MPGRLVG +
Sbjct: 243 AADLLALTLLTPPGEFGADVAIGSAQRFGVPLGFGGPHAAYFSTKDAFKRDMPGRLVGVS 302

Query: 297 ADVDGRRGWVLTLSTREQHIRREKATSNICTNSGLCALAFSIHLTMLGGTGFGRLAELNH 356
            D  G+    L + TREQHIRREKATSNICT   L A   S++    G  G  ++A   H
Sbjct: 303 VDRFGKPALRLAMQTREQHIRREKATSNICTAQVLLANIASMYAVYHGPKGLTQIARRVH 362

Query: 357 LAATRLEQKLRAVKGLRVLPQSYYNEFAVHLGDDADAAAVVD-ALADKGILAGVPASRFY 415
                L + L A+ G  V    +++   ++ G  A+ AAV D A A +  L  V A R  
Sbjct: 363 QLTAILAKGLTAL-GQNVEQAHFFDTLTLNTG--ANTAAVHDKARAQRINLRVVDAER-- 417

Query: 416 PTWPELKPVLILAATETNTEDDMDRLVA 443
                    + ++  ET T+ D++ L A
Sbjct: 418 ---------VGVSVDETTTQADIETLWA 436



 Score = 40.4 bits (93), Expect = 3e-07
 Identities = 77/393 (19%), Positives = 145/393 (36%), Gaps = 69/393 (17%)

Query: 7   TEADRRAMLDVIG-AKSVDDLFRDVPPS--ARLAGPLPLPSH------QGEMEVERAFTR 57
           T+AD   +  +    K++ D    V  +  A L    P+ SH        E E+ R   +
Sbjct: 427 TQADIETLWAIFADGKALPDFAAQVESTLPAALLRQSPVLSHPVFNRYHSETELMRYLRK 486

Query: 58  MAGKNLSAGCAPFFIGAGVYRHHVPAAVDQLLLRGEFLTAYTPYQP-EVSQGTLQMLFEF 116
           +A K+L+       +G+   +  + AA + + +      A  P+ P E S G L++  + 
Sbjct: 487 LADKDLALDRTMIPLGSCTMK--LNAASEMIPVTWAEFGALHPFAPAEQSAGYLELTSDL 544

Query: 117 QSQVATITGMDVANASMYDGATACAEAAIMACRITKRNR-------VIVSGGVHPHYAET 169
           ++ +   TG D  +     G+     A ++A R   ++R        ++    H     T
Sbjct: 545 EAMLCAATGYDAISLQPNAGSQG-EYAGLLAIRAYHQSRGDERRDICLIPSSAHG----T 599

Query: 170 LETSLRFTEMEADVLPPDPLG---MEDMIGRV---DSKTACVVVQNPGFFGTVRD-LRPL 222
              +     M   V   D  G   +ED+  +        A +++  P   G   + +R +
Sbjct: 600 NPATANMAGMRVVVTACDARGNVDIEDLRAKAIEHRDHLAALMITYPSTHGVFEEGIREI 659

Query: 223 AALCHEAGALLVVMVAEPTSLGLIESPGAMGADIVVCEGQSLGMGLNF------GGPGLG 276
             + H+ G  + +  A   ++  + +PG  G D+       L +   F      GGPG+G
Sbjct: 660 CGIIHDNGGQVYIDGANMNAMVGLCAPGKFGGDV-----SHLNLHKTFCIPHGGGGPGVG 714

Query: 277 LFATRDKYVRQMPGRLVGQTADVDGRRGWVLTLSTREQHIRREKATSNICTNSGLCALAF 336
               +      +PG                        H   E+    +C      A   
Sbjct: 715 PIGVKSHLTPFLPG------------------------HAAMERKEGAVCAAPFGSASIL 750

Query: 337 SI---HLTMLGGTGFGRLAELNHLAATRLEQKL 366
            I   +++M+GG G  R ++L  L A  + ++L
Sbjct: 751 PITWMYISMMGGAGLKRASQLAILNANYISRRL 783