Pairwise Alignments

Query, 164 a.a., pentapeptide repeat-containing protein from Magnetospirillum magneticum AMB-1

Subject, 419 a.a., hypothetical protein with pentapeptide repeats from Caulobacter crescentus NA1000 Δfur

 Score = 68.9 bits (167), Expect = 1e-16
 Identities = 56/163 (34%), Positives = 77/163 (47%), Gaps = 36/163 (22%)

Query: 21  ADCTQPAAPGVDWQRCYMDGRDFSRHDLSGARLRETSFQRARL----------------- 63
           AD T     G D ++  +D  +F   DL GA L + S +RA L                 
Sbjct: 59  ADFTGAILVGCDLRKAKLDNANFYGADLQGADLTDASLRRADLRGSSLRGANLTGADMFE 118

Query: 64  ----DGTVLA--KVDGYRV-------------RFISAALVGARLDDGVFSEADFTKADLG 104
               +GT+ A  + +GYRV                 A L  +RL   V ++ADF+ A L 
Sbjct: 119 ADLREGTIAAADRKEGYRVIEPTQREAFAAGANLSGANLERSRLSGIVATKADFSDAILK 178

Query: 105 GASLARADLRRARFYHASLRGADLTGARTLGAELLNADLSGAR 147
            A L RA+L++A F  A+L GADL+GA   GA+L NA L GA+
Sbjct: 179 DAKLVRANLKQANFNGANLAGADLSGANLAGADLRNAVLVGAK 221



 Score = 53.9 bits (128), Expect = 3e-12
 Identities = 41/117 (35%), Positives = 53/117 (45%), Gaps = 10/117 (8%)

Query: 30  GVDWQRCYMDGRDFSRHDLSGARLRETSFQRARLDGTVLAKVDGYRVRFISAALVGARLD 89
           G+D +   M G      DL    LR    + ARL G  L   D    +     +   RL 
Sbjct: 301 GLDMEGVQMQGAQLDGADLRACNLRRADLRGARLKGAKLTGADLRDAQLGPLLIAADRL- 359

Query: 90  DGVFSEADFTKADLGGASLARADLRRARFYHASLRGADLTGARTLGAELLNADLSGA 146
                  D T A L  A LARADLR+AR     + GAD++ A   GA+L + DL+GA
Sbjct: 360 ----LPVDLTGAILTNADLARADLRQAR-----MAGADVSRANFTGAQLRDLDLTGA 407



 Score = 52.0 bits (123), Expect = 1e-11
 Identities = 35/89 (39%), Positives = 44/89 (49%)

Query: 61  ARLDGTVLAKVDGYRVRFISAALVGARLDDGVFSEADFTKADLGGASLARADLRRARFYH 120
           A+ D    A++ G R  F    L G  +      +ADFT A L G  L +A L  A FY 
Sbjct: 24  AKHDRLWSARMGGARAVFAFCDLSGLSVPGRNLCDADFTGAILVGCDLRKAKLDNANFYG 83

Query: 121 ASLRGADLTGARTLGAELLNADLSGARWT 149
           A L+GADLT A    A+L  + L GA  T
Sbjct: 84  ADLQGADLTDASLRRADLRGSSLRGANLT 112



 Score = 51.2 bits (121), Expect = 2e-11
 Identities = 32/74 (43%), Positives = 39/74 (52%)

Query: 78  FISAALVGARLDDGVFSEADFTKADLGGASLARADLRRARFYHASLRGADLTGARTLGAE 137
           F  A LVG  L       A+F  ADL GA L  A LRRA    +SLRGA+LTGA    A+
Sbjct: 61  FTGAILVGCDLRKAKLDNANFYGADLQGADLTDASLRRADLRGSSLRGANLTGADMFEAD 120

Query: 138 LLNADLSGARWTDG 151
           L    ++ A   +G
Sbjct: 121 LREGTIAAADRKEG 134



 Score = 35.0 bits (79), Expect = 2e-06
 Identities = 29/74 (39%), Positives = 33/74 (44%), Gaps = 8/74 (10%)

Query: 77  RFISAALVGARLDDGVFSEADFTKADLGGASLARADLRRARFYHASLRGADLTGARTLGA 136
           R  SA + GAR        A F   DL G S+   +L  A F  A L G DL  A+   A
Sbjct: 28  RLWSARMGGAR--------AVFAFCDLSGLSVPGRNLCDADFTGAILVGCDLRKAKLDNA 79

Query: 137 ELLNADLSGARWTD 150
               ADL GA  TD
Sbjct: 80  NFYGADLQGADLTD 93



 Score = 35.0 bits (79), Expect = 2e-06
 Identities = 38/147 (25%), Positives = 53/147 (36%), Gaps = 21/147 (14%)

Query: 30  GVDWQRCYMDGRDFSRHDLSGARLRETSFQRARLDGTVLAKVDGYRV------------- 76
           G D     + G D     L GA+    +     +DG +  K  G  V             
Sbjct: 199 GADLSGANLAGADLRNAVLVGAKTLSWNVNDTNMDGALTDKPSGTSVSDLPYEQMIADHA 258

Query: 77  RFISAALVGARLDDGVFSEADFTKA-DLGGASLARADLRRARFYHASLRGADLTGARTLG 135
           R+I     G      VF +AD      + G +L     + A FY   + G  + GA+  G
Sbjct: 259 RWIETG--GGEGKPSVFDKADLRNLRSVRGFNLTALSAKGAVFYGLDMEGVQMQGAQLDG 316

Query: 136 AELL-----NADLSGARWTDGKTICAE 157
           A+L       ADL GAR    K   A+
Sbjct: 317 ADLRACNLRRADLRGARLKGAKLTGAD 343



 Score = 27.3 bits (59), Expect = 3e-04
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 5   LILAVFALIRPVEALAADCTQPAAPGVDWQRCYMDGRDFSRHDLSGARLRE 55
           L++A   L+ PV+   A  T       D ++  M G D SR + +GA+LR+
Sbjct: 352 LLIAADRLL-PVDLTGAILTNADLARADLRQARMAGADVSRANFTGAQLRD 401