Pairwise Alignments

Query, 761 a.a., DNA helicase II from Magnetospirillum magneticum AMB-1

Subject, 720 a.a., DNA helicase II from Escherichia coli ECOR38

 Score =  509 bits (1310), Expect = e-148
 Identities = 303/742 (40%), Positives = 426/742 (57%), Gaps = 51/742 (6%)

Query: 33  LQGLNPEQFQAVTTTDGPVLVLSGAGTGKTKVLTSRLAHILASNLAQPWQCLAVTFTNRA 92
           L  LN +Q +AV      +LVL+GAG+GKT+VL  R+A +++     P+  +AVTFTN+A
Sbjct: 7   LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66

Query: 93  AREMKERVGQLVGPVSDGIWLGTFHSLCLRILRSHAEAVGLGGDFTVLDSDDQMRVLKQV 152
           A EM+ R+GQL+G    G+W+GTFH L  R+LR+H     L  DF +LDS+DQ+R+LK++
Sbjct: 67  AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126

Query: 153 MAEAHVDPKGTPPQGLMATIQRWKDRAVTPDKAAADGGAEGQA-KTLYRAYQDRLRSLNA 211
           +   ++D K  PP+  M  I   KD  + P    + G    Q  + +Y+AYQ+       
Sbjct: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGL 186

Query: 212 CDFGDLLLHVLTVFLSDAEALARWQGRFRYLLVDEYQDTNVAQYLWLRLLAQTHRNICCV 271
            DF +LLL    ++L+    L  ++ RF  +LVDE+QDTN  QY W+RLLA     +  V
Sbjct: 187 VDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIV 246

Query: 272 GDDDQSIYSWRGAEVGNILRFEKDFPGAKVVRLESNYRSTPHILAAASTLIANNEGRLGK 331
           GDDDQSIY WRGA+V NI RF  DFPGA+ +RLE NYRST +IL+AA+ LI NN GRLGK
Sbjct: 247 GDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGK 306

Query: 332 TL-RPGIIHEPEAIEKIRTKAVWDGEAEARMVAEEIETLQRRGEKLSSMAILVRAGFQTR 390
            L   G   EP     I     ++   EAR V   I+T Q  G  L+  AIL R+  Q+R
Sbjct: 307 KLWTDGADGEP-----ISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSR 361

Query: 391 EFEERLITTGIPYRVIGGPRFYERLEIRDAMAYLRLVVSAADGLAFERVVNTPKRGLGEA 450
             EE L+   +PYR+ GG RF+ER EI+DA++YLRL+ +  D  AFERVVNTP RG+G+ 
Sbjct: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDR 421

Query: 451 AVQTIHMVARAEQVPLLEAARRLVDTDELKPKARQALARFIEDVDRWRSLLESMPHPELA 510
            +  +   +R  Q+ L +A R L+    L  +A  AL RF+E +D        MP     
Sbjct: 422 TLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQT 481

Query: 511 ATILDESGYVDMWKADKSADAPGRVENLKELVAALEEYD---------SLASFLEHVALV 561
             ++ +SG   M++ +K      R+ENL+ELV A  ++           L +FL H AL 
Sbjct: 482 DRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL- 540

Query: 562 MENDSRADL--DSVVIMTLHGAKGLEFDSVFLPGWEEEVFPHSRALAESGTKGLEEERRL 619
              + +AD   D+V +MTLH AKGLEF  VF+ G EE +FP   +L E G   LEEERRL
Sbjct: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR--LEEERRL 598

Query: 620 AYVGLTRARKRVLVSFAANRRIYNQWKSQLPSRFVEELPESHVERSGERGLHGGGLAESK 679
           AYVG+TRA +++ +++A  RR+Y +     PSRF+ ELPE  VE               +
Sbjct: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEE-----------VRLR 647

Query: 680 AAWNDPAWSRARFGQPRRETAAAPSWGQAKPRESAGGFKPGARVFHDKFGNGTVLSLDG- 738
           A  + P  S  R G P                E+   +K G RV H KFG GT+++++G 
Sbjct: 648 ATVSRPV-SHQRMGTPM--------------VENDSDYKLGQRVRHAKFGEGTIVNMEGS 692

Query: 739 ---NKLEIAFDKAGIKKVLDSF 757
              ++L++AF   GIK ++ ++
Sbjct: 693 GEHSRLQVAFQGQGIKWLVAAY 714