Pairwise Alignments

Query, 761 a.a., DNA helicase II from Magnetospirillum magneticum AMB-1

Subject, 824 a.a., DNA helicase II from Agrobacterium fabrum C58

 Score =  827 bits (2137), Expect = 0.0
 Identities = 434/784 (55%), Positives = 546/784 (69%), Gaps = 53/784 (6%)

Query: 26  VPPDAPWLQGLNPEQFQAVTTTDGPVLVLSGAGTGKTKVLTSRLAHILASNLAQPWQCLA 85
           V P   +L GLNPEQ +AV T DGPVLVL+GAGTGKT+VLT+R+AHILA+  A P Q LA
Sbjct: 46  VRPAHDYLSGLNPEQREAVETLDGPVLVLAGAGTGKTRVLTTRIAHILATGRAYPSQILA 105

Query: 86  VTFTNRAAREMKERVGQLVGPVSDGI-WLGTFHSLCLRILRSHAEAVGLGGDFTVLDSDD 144
           VTFTN+AAREMKER+G LVG   +G+ WLGTFHS+ +++LR HAE +GL  DFT+LD+DD
Sbjct: 106 VTFTNKAAREMKERIGVLVGGAVEGMPWLGTFHSIGVKLLRRHAELIGLKSDFTILDTDD 165

Query: 145 QMRVLKQVMAEAHVDPKGTPPQGLMATIQRWKDRAVTPD---KAAADGGAEGQAKTLYRA 201
            +R++KQ++    +D K  P +     I  WK++ +TP    +  +   A G+ + LY A
Sbjct: 166 VVRLIKQLIQAEGLDDKRWPAKQFAGMIDGWKNKGLTPPDIPEGDSRAFANGKGRELYAA 225

Query: 202 YQDRLRSLNACDFGDLLLHVLTVFLSDAEALARWQGRFRYLLVDEYQDTNVAQYLWLRLL 261
           YQ RL++LNACDFGDLLLH +++F    + L  +  +FRY+LVDEYQDTN AQY+WLRLL
Sbjct: 226 YQARLKTLNACDFGDLLLHPISIFRRHTDILKEYHQKFRYILVDEYQDTNTAQYMWLRLL 285

Query: 262 AQTHR----NICCVGDDDQSIYSWRGAEVGNILRFEKDFPGAKVVRLESNYRSTPHILAA 317
           AQ  +    N+CCVGDDDQSIY WRGAEV NILRF+KDFPGAKV++LE NYRST HIL A
Sbjct: 286 AQRAKDEPQNVCCVGDDDQSIYGWRGAEVDNILRFDKDFPGAKVIKLERNYRSTEHILGA 345

Query: 318 ASTLIANNEGRLGKTLRPGIIHEPEAIEKIRTKAVWDGEAEARMVAEEIETLQRRGEKLS 377
           A  LIA+NEGRLGKTL        +  EK+   A WD E EAR V EEIE LQR+  KL+
Sbjct: 346 AGHLIAHNEGRLGKTLFTERSSPDD--EKVVVHAAWDSEEEARAVGEEIEQLQRKNYKLN 403

Query: 378 SMAILVRAGFQTREFEERLITTGIPYRVIGGPRFYERLEIRDAMAYLRLVVSAADGLAFE 437
            MAILVRA FQ REFE+R +T G+ YRVIGGPRFYERLEIRDAMAY RLV   AD LAFE
Sbjct: 404 DMAILVRASFQMREFEDRFVTLGLNYRVIGGPRFYERLEIRDAMAYFRLVCQPADDLAFE 463

Query: 438 RVVNTPKRGLGEAAVQTIHMVARAEQVPLLEAARRLVDTDELKPKARQALARFIEDVDRW 497
           R+VNTPKRGLG+  ++ +H  ARA  +P+L AA  +++TDELKPKAR+AL   ++D  RW
Sbjct: 464 RIVNTPKRGLGDTTIRNLHDYARARDIPMLAAAADIIETDELKPKARKALFDVVQDFRRW 523

Query: 498 RSLLESMPHPELAATILDESGYVDMWKADKSADAPGRVENLKELVAALEEYDSLASFLEH 557
           + LLE+  H  LA  ILDESGY  MW+ADK+A+APGR+ENLKEL+ ++E ++S+  FLEH
Sbjct: 524 QGLLENTEHTTLAEQILDESGYTAMWQADKTAEAPGRLENLKELIRSMESFESMRGFLEH 583

Query: 558 VALVMENDSRADLDSVVIMTLHGAKGLEFDSVFLPGWEEEVFPHSRALAESGTKGLEEER 617
           VALVM+ +  A+LD+V IMTLH AKGLEFD+VFLPGWEE +FPH RAL E G  GLEEER
Sbjct: 584 VALVMDAEQNAELDAVSIMTLHSAKGLEFDTVFLPGWEEGLFPHQRALDEGGRSGLEEER 643

Query: 618 RLAYVGLTRARKRVLVSFAANRRIYNQWKSQLPSRFVEELPESHVERSGERGLHG----- 672
           RLAYVG+TRA+K   + F +NRRI+  W+S LPSRF++ELP +HV+ +     +G     
Sbjct: 644 RLAYVGITRAKKLCHIWFVSNRRIHGLWQSTLPSRFLDELPPAHVDVAASDSNYGGYGGR 703

Query: 673 GGLAESK--------AAWNDPAWSRARFGQPRRETAAAPSW-------------GQAKPR 711
           GG  +S+          ++ P W RA   Q  R  A   +W             G++ PR
Sbjct: 704 GGYGQSRFDKADPFTNNYSTPGWKRA---QQNRSDATRDNWGTRSGHAVERIGYGESGPR 760

Query: 712 --------------ESAGGFKPGARVFHDKFGNGTVLSLDGNKLEIAFDKAGIKKVLDSF 757
                         +    F  G RVFH KFGNG + +++GNKL I FD+AG K+VLD F
Sbjct: 761 TRTIDGELVAKSVADKPSKFFVGDRVFHLKFGNGNISAIEGNKLTINFDRAGEKRVLDGF 820

Query: 758 VSAV 761
           V  V
Sbjct: 821 VEKV 824