Pairwise Alignments

Query, 389 a.a., isovaleryl-CoA dehydrogenase from Magnetospirillum magneticum AMB-1

Subject, 384 a.a., Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1) from Variovorax sp. SCN45

 Score =  256 bits (654), Expect = 8e-73
 Identities = 150/368 (40%), Positives = 208/368 (56%), Gaps = 4/368 (1%)

Query: 20  RDSVAAFAATEIAPRAAEIDRSNEFPNELWPRLGAMGLLGITVDEKYGGAGMGYLEHVVA 79
           RDSV   A   +AP AAEID ++ FP EL P  G +GLL + V E YGG G       +A
Sbjct: 11  RDSVRRMAERHVAPIAAEIDENDRFPTELIPVYGDIGLLQLWVPEAYGGPGANLTMVCMA 70

Query: 80  MEEISRASASVGLSYGAHSNLCVNQIKRNGTEAQKMKYLPKLISGEYIGALAMSEPNAGS 139
            EEISR S + GL  G  + + V  +   GTEAQK ++LP +  G  + A+A+SEP AGS
Sbjct: 71  REEISRHSEACGLLAG-ETTMFVLPLMHFGTEAQKQRFLPIVAQGRTLTAIALSEPGAGS 129

Query: 140 DVVSMKLKAEKKGDRYVLNGTKMWITNGPDADVIVVYAKTDVTAGPRGITAFLVE-KTFK 198
           DV +++ +A + GD YV+NG K W + G  AD I+V+AKT    G   I+ F+V+ KT  
Sbjct: 130 DVSAIRTRAVRDGDSYVINGQKQWCSFGSVADYIMVFAKTSDAGGVDNISPFIVDVKTMP 189

Query: 199 GFSVAQKLDKLGMRGSNTGELVFQDCEVPEENVLGAVGKGVNVLMSGLDYERVVLTGGPL 258
           G S  +K  K+GMRG+    +   +  VP EN+LG  GKG    M  LD  R  +    +
Sbjct: 190 GVSFGKKERKMGMRGAVNVPVYLDNVRVPAENMLGEEGKGFRAAMRALDLNRPAIAAASV 249

Query: 259 GIMAACMDVVVPYVHERTQFGQPIGTFQLMQGKLADMYTTFNACRAYTYAVAKACDRGET 318
           G+    +D  V Y  +R QF + I  FQ +Q  LADM     A R   Y   +A DRGE 
Sbjct: 250 GLAQGALDAAVAYAQQRKQFKRFISEFQGVQFMLADMAMQIQAARCLLYECTRAGDRGEW 309

Query: 319 SRKD--AAGVILYGAEKATWMALEAIQTLGGNGYINEYATGRLLRDAKLYEIGAGTSEIR 376
            R    A+    + ++ A  +  +A+Q LGG GY  +Y   R++RDAKL +I  GT++I+
Sbjct: 310 DRLPMLASMAKCFASDMAMKVTTDAVQVLGGYGYTKDYPVERMMRDAKLNQIFEGTNQIQ 369

Query: 377 RMLIGREL 384
           R++I REL
Sbjct: 370 RVVIAREL 377