Pairwise Alignments

Query, 281 a.a., IS3 family transposase from Magnetospirillum magneticum AMB-1

Subject, 295 a.a., IS3 family transposase from Escherichia coli ECRC98

 Score =  113 bits (283), Expect = 4e-30
 Identities = 83/283 (29%), Positives = 135/283 (47%), Gaps = 16/283 (5%)

Query: 11  IGAQCHLLSIARSSFYY---------EPLGETEANLELMRLIDRQFLET-PFYGVRQMAW 60
           +G  C  L IA S++Y+         +     + +  L R I R + E    YGVR++  
Sbjct: 13  VGPVCSELHIAPSTYYHCQQQRHHPDKRSARAQHDDWLKREIQRVYDENHQVYGVRKVWR 72

Query: 61  HLQNEGHPVNVKRVRRLMRLMGLMPIYQ--KPNTSKPAKGHKTYPYLLRGLRIDRPNQVW 118
            L  EG  V    V RLM +MGL  + +  K  T+   K       + R    +RP+Q+W
Sbjct: 73  QLLREGIRVARCTVARLMAVMGLAGVLRGKKVRTTISRKAVAAGDRVNRQFVAERPDQLW 132

Query: 119 CADITYLPMRRGFLYLIAIMDWATRKVLAWRISNTLEADFCVEVLNEAILRFGPP-EIMN 177
            AD TY+   +GF+Y+  I+D     ++ WR+S+++E  F ++ L +A+    P   I +
Sbjct: 133 VADFTYVSTWQGFVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQALWARRPSGTIHH 192

Query: 178 TDQGSQFTSFAWIDRLKRAGTRISMDGKGRCIDNVFIERLWRSLKYECVYLHAWETGSQA 237
           +D+GSQ+ S A+ +RLK AG   S    G   DN   E +    K E ++  +W+  ++ 
Sbjct: 193 SDKGSQYVSLAYTERLKEAGLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRAEV 252

Query: 238 RAGIGPWITFYNHKRPHAAHGGRTPA---VVYWNTINQTDQQA 277
                 W+ +YN++R     G   PA     Y+ +I   D  A
Sbjct: 253 ELATLTWVDWYNNRRLLGRLGHTPPAEAEKAYYASIGNDDLAA 295