Pairwise Alignments

Query, 816 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit B from Magnetospirillum magneticum AMB-1

Subject, 806 a.a., DNA gyrase subunit B from Pseudomonas putida KT2440

 Score =  815 bits (2106), Expect = 0.0
 Identities = 432/817 (52%), Positives = 562/817 (68%), Gaps = 36/817 (4%)

Query: 19  EEYGAGSIQVLRGLEAVRKRPGMYIGDTDDGSGLHRMIYEAVDNAVDEIMNGFGDRCDVV 78
           + Y + SI+VL+GL+AVRKRPGMYIGDTDDGSGLH M++E VDN++DE + G  D   V+
Sbjct: 5   QTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDDITVI 64

Query: 79  LNADGSVLVTDNGRGIPVDIHPEEGISAAEVALTKLHAGGKFEQNSNRISSGLHGVGISV 138
           ++ D S+ V DNGRGIPVD+H EEG+SAAEV +T LHAGGKF+ NS ++S GLHGVG+SV
Sbjct: 65  IHPDESISVRDNGRGIPVDVHKEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSV 124

Query: 139 VNALSEWLELRIWRHGKEHFMRFRHGEPEAPLAVVGECGDRTGTQVVFLPSKGTFSHTDF 198
           VNALSE L L + R GK     + HG P+AP+AVVG+  + TGT + F PS  TF +  F
Sbjct: 125 VNALSEKLVLTVRRSGKIWEQTYVHGVPQAPMAVVGD-SETTGTHIHFKPSAETFKNIHF 183

Query: 199 DFDTVEHRLRELAFLNSRATLLIKDERHAETREALLHYEGGVQAFVQWLDRSKEALHAPI 258
            +D +  R+REL+FLNS   +L+KDER    +E    YEGG++AFV++L+ +K  +++ +
Sbjct: 184 SWDILAKRIRELSFLNSGVGILLKDERSG--KEEFFKYEGGLRAFVEYLNTNKTPVNSQV 241

Query: 259 LI--AAEKDVVRLELSMEWTDSYHETCLCFTNNVPQKDGGTHLAGFRAALTRTINAYAND 316
                   D V +E++++W DS++E  LCFTNN+PQ+DGGTHL GFR++LTR++N+Y   
Sbjct: 242 FHFNVQRDDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSSLTRSLNSYIEQ 301

Query: 317 SGIAKKEKVNLAGDDMREGLTCVLSVKMPDPKFSSQAKEKLVSSEVRPLVENLVGEKLAE 376
            G+AKK KV   GDD REGLT ++SVK+PDPKFSSQ K+KLVSSEV+  VE  + +  A+
Sbjct: 302 EGLAKKNKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMNKYFAD 361

Query: 377 WFEEHPAEARKVVTKVVEAAAAREAARKARELTRRKGVLDIATLPGKLADCQERDPALSE 436
           +  E+P EA+ VV K+++AA AREAARKARE+TRRKG LDIA LPGKLADCQE+DPALSE
Sbjct: 362 FLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSE 421

Query: 437 LFIVEGDSAGGSAKQGRNRANQAILPLKGKILNVERARFDKMLSSAEIGTLIAAMGTGIG 496
           L++VEGDSAGGSAKQGRNR  QAILPLKGKILNVE+ARFDKM+SS E+GTLI A+G GIG
Sbjct: 422 LYLVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIG 481

Query: 497 REDFNVDKARYHKIIIMTDADVDGSHIRTLLLTFFYRQMPALIERGYLYIAQPPLYRAKR 556
           RE++N+DK RYH IIIMTDADVDGSHIRTLLLTFF+RQ+P L+ERGY+YIAQPPLY+ KR
Sbjct: 482 REEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELVERGYIYIAQPPLYKVKR 541

Query: 557 GQSEVYLKDDRALEEYLIDGGLADAVLRMADGTQLAS-IDLRALVEQARSVRNLLTPLSR 615
           G+ E Y+KDD A+EEY+    L DA L + +     S + L ALV + RSV   L  LSR
Sbjct: 542 GKQEQYIKDDEAMEEYMTQSALEDASLHLDESAPAVSGVQLEALVNEFRSVMKTLKRLSR 601

Query: 616 RVPLKLVEQAAIADALDSSLLTDAVRGPAIVQGLAQRLDALETHLERGWTGTWVEGDGYT 675
             P +L E       +    L D     A +     RL++ +               G  
Sbjct: 602 LYPEELTEHFVYLPEVTLEQLGDHAVMQAWLAQFQARLNSSQK-------------SGLA 648

Query: 676 FSRTLRGVTE-----------THALDSAV------IRSAEARRLHELAPRLRETFDRPAA 718
           ++ +LR   E           +H L S +        S + R +  +  +L       A 
Sbjct: 649 YNASLREDKERNVWLPEVEITSHGLASYITFNRDFFGSNDYRTVVNIGAKLSSLLGEGAY 708

Query: 719 LMVRERETVLSGPVALVTAVMEQGRRGIAIQRYKGLGEMNPEQLWETTLDPQARSLLQVK 778
           +   ER   +      +  +M +  +   IQRYKGLGEMNP+QLWETT+DP  R +L+V 
Sbjct: 709 VQRGERRKAIVEFKEGLDWLMNETTKRHTIQRYKGLGEMNPDQLWETTMDPTVRRMLKVT 768

Query: 779 VAQADDAEQVFSTLMGDVVEPRRDFIQTNALKVSNLD 815
           +  A  A+Q+F+TLMGD VEPRRDFI++NAL VSNLD
Sbjct: 769 IEDAIAADQIFNTLMGDAVEPRRDFIESNALSVSNLD 805