Pairwise Alignments

Query, 816 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit B from Magnetospirillum magneticum AMB-1

Subject, 871 a.a., DNA gyrase subunit B (EC 5.99.1.3) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  726 bits (1875), Expect = 0.0
 Identities = 411/853 (48%), Positives = 544/853 (63%), Gaps = 55/853 (6%)

Query: 10  DPHASANGAEEYGAGSIQVLRGLEAVRKRPGMYIGDTDDGSGLHRMIYEAVDNAVDEIMN 69
           D H  A  +E YG GSIQ+L GLEAVRKRPGMYIGDT DG+GLH +++E VDN++DE + 
Sbjct: 28  DAH-QAGASEGYGEGSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVVDNSIDEALA 86

Query: 70  GFGDRCDVVLNADGSVLVTDNGRGIP----VDIHPEEGISAAEVALTKLHAGGKFEQNSN 125
           G  D   V ++ D S+ V DNGRGIP    +D   E   SA+E+ALT+LHAGGKF QNS 
Sbjct: 87  GHCDDIVVTIHTDNSISVVDNGRGIPTGVKMDDKHEPKRSASEIALTELHAGGKFNQNSY 146

Query: 126 RISSGLHGVGISVVNALSEWLELRIWRHGKEHFMRFRHGEPE-------------APLAV 172
           ++S GLHGVG+S VNALS+WL L + R G  H + F  G  +             +P+ +
Sbjct: 147 KVSGGLHGVGVSCVNALSQWLRLTVRREGHVHQLEFARGFVQNRVIETTPTGVEISPMRI 206

Query: 173 VGECGDRTGTQVVFLPSKGTF-SHTDFDFDTVEHRLRELAFLNSRATLLIKDERHAETRE 231
            G   ++ GT+V FLP    F  + DF ++ +  RLREL+FLN+   + +KDER    +E
Sbjct: 207 TGAT-EKRGTEVHFLPDYEIFRENADFHYEILSKRLRELSFLNNGVRIRLKDERSG--KE 263

Query: 232 ALLHYEGGVQAFVQWLDRSKEALHAPILIAA------EKDVVRLELSMEWTDSYHETCLC 285
                 GGV+ FV ++++ K  LH  +  A       +   + +E++M+W   Y+E  LC
Sbjct: 264 DDFSGAGGVKGFVDFINKGKTVLHPNVFHAMGDRQSDQGTNIGVEVAMQWNSGYNEQVLC 323

Query: 286 FTNNVPQKDGGTHLAGFRAALTRTINAYANDSGIAKKEKVNLAGDDMREGLTCVLSVKMP 345
           FTNN+PQ+DGGTHL G RAA+TR IN Y  +  +AKK KV + GDDMREGL CVLSVK+P
Sbjct: 324 FTNNIPQRDGGTHLTGLRAAMTRVINKYIEEHELAKKAKVEVTGDDMREGLCCVLSVKVP 383

Query: 346 DPKFSSQAKEKLVSSEVRPLVENLVGEKLAEWFEEHPAEARKVVTKVVEAAAAREAARKA 405
           +PKFSSQ K+KLVSSEVR  VE++V   LA++ +E P +A+ +  K+VEAA AREAARKA
Sbjct: 384 EPKFSSQTKDKLVSSEVRGPVEDIVSRLLADYLQERPNDAKIICGKIVEAARAREAARKA 443

Query: 406 RELTRRKGVLDIATLPGKLADCQERDPALSELFIVEGDSAGGSAKQGRNRANQAILPLKG 465
           RE+TRRKGVLD   LPGKLADCQE+DPAL E++IVEGDSAGGSAKQGR+R  QAILPL+G
Sbjct: 444 REMTRRKGVLDGMGLPGKLADCQEKDPALCEIYIVEGDSAGGSAKQGRDRKFQAILPLRG 503

Query: 466 KILNVERARFDKMLSSAEIGTLIAAMGTGIGR----------EDFNVDKARYHKIIIMTD 515
           KILNVE+AR++K+L+S EI TLI A+GTGIG+          +DFNV K RYH+IIIMTD
Sbjct: 504 KILNVEKARYEKLLTSNEILTLITALGTGIGKATGVGGTAGVDDFNVAKLRYHRIIIMTD 563

Query: 516 ADVDGSHIRTLLLTFFYRQMPALIERGYLYIAQPPLYRAKRGQSEVYLKDDRALEEYLID 575
           ADVDG+HIRTLLLTFFYRQMP L+ERG++YIAQPPLY+ K G+ E+YLKD  AL+ +L+ 
Sbjct: 564 ADVDGAHIRTLLLTFFYRQMPELVERGHIYIAQPPLYKVKAGKEELYLKDGSALDGFLLR 623

Query: 576 GGLADAVLRMADGTQ--LASIDLRALVEQARSVRNLLTPLSRRVPLKLVEQAAIADALDS 633
             L DA +     TQ  L    L  L  + +   +++  LS  +  + +   A   AL+ 
Sbjct: 624 IALKDASVLTGGATQTTLTGDTLGELARKHQVAESVIARLSNFMDAEALRAIADGVALNL 683

Query: 634 SLLTDAVRGPAIVQGLAQRLDALETHLERGWTGTWVEGDGYT------FSRTLRGVTETH 687
             +  A      +Q   + L       E        E D  T       SR   G  ++ 
Sbjct: 684 DSVEQAEVSAVALQAKLRELATTGVPAE-----VAAEFDVRTDKPILRISRRHHGNIKSS 738

Query: 688 ALDSAVIRSAEARRLHELAPRLRETFDRPAALM----VRERETVLSGPVALVTAVMEQGR 743
            L    +  A+   L   A   R      A ++     +++E  +      +  ++ +  
Sbjct: 739 VLTQDFVHGADYAALATAADTFRGLLGEGAKVVRGEGDKQKEEKVGDFRQAMRWLISEAE 798

Query: 744 RGIAIQRYKGLGEMNPEQLWETTLDPQARSLLQVKVAQADDAEQVFSTLMGDVVEPRRDF 803
           R  + QRYKGLGEMNPEQLWETT+DP  R LL+V++  A +A++VF+ LMGD VEPRRDF
Sbjct: 799 RTTSRQRYKGLGEMNPEQLWETTMDPTVRRLLRVQIDDAIEADRVFTMLMGDEVEPRRDF 858

Query: 804 IQTNALKVSNLDV 816
           I+TNAL+  N+DV
Sbjct: 859 IETNALRAGNIDV 871