Pairwise Alignments

Query, 816 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit B from Magnetospirillum magneticum AMB-1

Subject, 804 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit B GyrB from Escherichia coli ECRC99

 Score =  846 bits (2185), Expect = 0.0
 Identities = 438/806 (54%), Positives = 576/806 (71%), Gaps = 10/806 (1%)

Query: 18  AEEYGAGSIQVLRGLEAVRKRPGMYIGDTDDGSGLHRMIYEAVDNAVDEIMNGFGDRCDV 77
           +  Y + SI+VL+GL+AVRKRPGMYIGDTDDG+GLH M++E VDNA+DE + G      V
Sbjct: 2   SNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEIIV 61

Query: 78  VLNADGSVLVTDNGRGIPVDIHPEEGISAAEVALTKLHAGGKFEQNSNRISSGLHGVGIS 137
            ++AD SV V D+GRGIP  IHPEEG+SAAEV +T LHAGGKF+ NS ++S GLHGVG+S
Sbjct: 62  TIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVS 121

Query: 138 VVNALSEWLELRIWRHGKEHFMRFRHGEPEAPLAVVGECGDRTGTQVVFLPSKGTFSH-T 196
           VVNALS+ LEL I R GK H   + HG P+APLAV GE  ++TGT V F PS  TF++ T
Sbjct: 122 VVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGET-EKTGTMVRFWPSLETFTNVT 180

Query: 197 DFDFDTVEHRLRELAFLNSRATLLIKDERHAETREALLHYEGGVQAFVQWLDRSKEALHA 256
           +F+++ +  RLREL+FLNS  ++ ++D+R  + +E   HYEGG++AFV++L+++K  +H 
Sbjct: 181 EFEYEILAKRLRELSFLNSGVSIRLRDKR--DGKEDHFHYEGGIKAFVEYLNKNKTPIHP 238

Query: 257 PIL-IAAEKDVVRLELSMEWTDSYHETCLCFTNNVPQKDGGTHLAGFRAALTRTINAYAN 315
            I   + EKD + +E++++W D + E   CFTNN+PQ+DGGTHLAGFRAA+TRT+NAY +
Sbjct: 239 NIFYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMD 298

Query: 316 DSGIAKKEKVNLAGDDMREGLTCVLSVKMPDPKFSSQAKEKLVSSEVRPLVENLVGEKLA 375
             G +KK KV+  GDD REGL  V+SVK+PDPKFSSQ K+KLVSSEV+  VE  + E LA
Sbjct: 299 KEGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLA 358

Query: 376 EWFEEHPAEARKVVTKVVEAAAAREAARKARELTRRKGVLDIATLPGKLADCQERDPALS 435
           E+  E+P +A+ VV K+++AA AREAAR+ARE+TRRKG LD+A LPGKLADCQERDPALS
Sbjct: 359 EYLLENPTDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALS 418

Query: 436 ELFIVEGDSAGGSAKQGRNRANQAILPLKGKILNVERARFDKMLSSAEIGTLIAAMGTGI 495
           EL++VEGDSAGGSAKQGRNR NQAILPLKGKILNVE+ARFDKMLSS E+ TLI A+G GI
Sbjct: 419 ELYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGI 478

Query: 496 GREDFNVDKARYHKIIIMTDADVDGSHIRTLLLTFFYRQMPALIERGYLYIAQPPLYRAK 555
           GR+++N DK RYH IIIMTDADVDGSHIRTLLLTFFYRQMP ++ERG++YIAQPPLY+ K
Sbjct: 479 GRDEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVK 538

Query: 556 RGQSEVYLKDDRALEEYLIDGGLADAVLRM-ADGTQLASIDLRALVEQARSVRNLLTPLS 614
           +G+ E Y+KDD A+++Y I   L  A L   A    LA   L  LV +  + + ++  + 
Sbjct: 539 KGKQEQYIKDDEAMDQYQISIALDGATLHTNASAPALAGEALEKLVSEYNATQKMINRME 598

Query: 615 RRVPLKLVEQAAIADALDSSLLTDAVRGPAIVQGLAQRLDALETHLERGWTGTWVEGDGY 674
           RR P  ++++      L  + L+D       V  L   L+  E H  +         +  
Sbjct: 599 RRYPKAMLKELIYQPTLTEADLSDEQTVTRWVNALVSELNDKEQHGSQWKFDVHTNAEQN 658

Query: 675 TFSRTLR----GVTETHALDSAVIRSAEARRLHELAPRLRETFDRPAALMVRERETVLSG 730
            F   +R    GV   + LD   I   E RR+  L  +LR   +  A +   ER   ++ 
Sbjct: 659 LFEPIVRVRTHGVDTDYPLDHEFITGGEYRRICTLGEKLRGLLEEDAFIERGERRQPVAS 718

Query: 731 PVALVTAVMEQGRRGIAIQRYKGLGEMNPEQLWETTLDPQARSLLQVKVAQADDAEQVFS 790
               +  ++++ RRG++IQRYKGLGEMNPEQLWETT+DP++R +L+V V  A  A+Q+F+
Sbjct: 719 FEQALDWLVKESRRGLSIQRYKGLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADQLFT 778

Query: 791 TLMGDVVEPRRDFIQTNALKVSNLDV 816
           TLMGD VEPRR FI+ NALK +N+D+
Sbjct: 779 TLMGDAVEPRRAFIEENALKAANIDI 804