Pairwise Alignments

Query, 466 a.a., chromosomal replication initiator protein DnaA from Magnetospirillum magneticum AMB-1

Subject, 467 a.a., chromosomal replication initiation protein (NCBI) from Escherichia coli BW25113

 Score =  386 bits (992), Expect = e-112
 Identities = 208/475 (43%), Positives = 299/475 (62%), Gaps = 21/475 (4%)

Query: 1   MAKSEWDRVKVRLKDEVGDAAYRSWLRPITLHDMSEDAVKLALPTRFMRDWVNTHYAERI 60
           M+ S W +   RL+DE+    +  W+RP+   ++S++ + L  P RF+ DWV   Y   I
Sbjct: 1   MSLSLWQQCLARLQDELPATEFSMWIRPLQA-ELSDNTLALYAPNRFVLDWVRDKYLNNI 59

Query: 61  RTLW----GAENPAIR---NVEIVVEAARAVSVAQNAAKASVAKVVPSPAAAPVRAA--- 110
             L     GA+ P +R     + V +  +A   +  AA A VA+  P  AA   R+    
Sbjct: 60  NGLLTSFCGADAPQLRFEVGTKPVTQTPQAAVTSNVAAPAQVAQTQPQRAAPSTRSGWDN 119

Query: 111 -AAPCAPAAAPNADNDELGAPLDNRFTFKNFVVGKPNEFAWAAARRVAEADQVSFNPLFL 169
             AP  P    N         ++ + TF NFV GK N+ A AAAR+VA+    ++NPLFL
Sbjct: 120 VPAPAEPTYRSN---------VNVKHTFDNFVEGKSNQLARAAARQVADNPGGAYNPLFL 170

Query: 170 YGGVGLGKTHLMHAIAHHIRERNPERSVLYLSAEKFMYRFIRALRGQDTMSFKEQFRSVD 229
           YGG GLGKTHL+HA+ + I  R P   V+Y+ +E+F+   ++AL+      FK  +RSVD
Sbjct: 171 YGGTGLGKTHLLHAVGNGIMARKPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVD 230

Query: 230 VLMIDDVQFIAGKDATQEEFFHTFNALVDQGRQIVISADKSPSDLEGIEERLRSRMACGL 289
            L+IDD+QF A K+ +QEEFFHTFNAL++  +QI++++D+ P ++ G+E+RL+SR   GL
Sbjct: 231 ALLIDDIQFFANKERSQEEFFHTFNALLEGNQQIILTSDRYPKEINGVEDRLKSRFGWGL 290

Query: 290 VADIHATTYELRLGILHSKAEQMGVLVPQKVMEFLAHKIISNVRELEGALNRVVAHSQLV 349
              I     E R+ IL  KA++  + +P +V  F+A ++ SNVRELEGALNRV+A++   
Sbjct: 291 TVAIEPPELETRVAILMKKADENDIRLPGEVAFFIAKRLRSNVRELEGALNRVIANANFT 350

Query: 350 GRAITLETTQEVLHDLLRASDRRITIEEIQKKVAEHFTIKLAEMSSARRSRQVARPRQIA 409
           GRAIT++  +E L DLL   ++ +TI+ IQK VAE++ IK+A++ S RRSR VARPRQ+A
Sbjct: 351 GRAITIDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKVADLLSKRRSRSVARPRQMA 410

Query: 410 MYLAKQLTSRSLPEIGRKFGGRDHTTVMHAVKKVEELKECDQNFAEDVELLRRML 464
           M LAK+LT+ SLPEIG  FGGRDHTTV+HA +K+E+L+E   +  ED   L R L
Sbjct: 411 MALAKELTNHSLPEIGDAFGGRDHTTVLHACRKIEQLREESHDIKEDFSNLIRTL 465