Pairwise Alignments

Query, 393 a.a., DNA polymerase IV from Magnetospirillum magneticum AMB-1

Subject, 425 a.a., DUF4113 domain-containing protein from Magnetospirillum magneticum AMB-1

 Score = 96.3 bits (238), Expect = 1e-24
 Identities = 106/370 (28%), Positives = 152/370 (41%), Gaps = 35/370 (9%)

Query: 46  AHIDCDAFYASVEKRDNPALADKPVIVGHPGGRGVVTTACYVARKFGPRSAMPMFKALEL 105
           A +DC+ FY S E+  NPAL  KPVIV      G        A+  G     P FK   L
Sbjct: 5   ALVDCNNFYVSCERAFNPALEGKPVIV-MSNNDGCAVARSAEAKAIGVGMGEPAFKLRHL 63

Query: 106 CPH--AVVIPPNIAKYKQVSAQIRALFEKATPLVEPLSLDEAYLDLSPGVRLVDRPAAVL 163
                 +++  N A Y  +S ++ ++    +P  E  S+DE +LDL         P   L
Sbjct: 64  VDSHGLIMLSSNYALYGDMSERVMSVLATFSPGAEIYSIDECFLDLD------GMPVDNL 117

Query: 164 LA---RLARAIRLQVGITVSVGLSYNKFLAKMASDL----NKPEGFSVIGREE--AEAFL 214
            A   ++   +R   GI VSVG+   K LAK+A+ L     K  G   + R+    EA L
Sbjct: 118 TAWSQQVRATVRRWTGIPVSVGIGTTKTLAKLANRLAKKSKKANGVLDLSRDARWIEAAL 177

Query: 215 APRPVTALFGIGAATAARMADQGITTIAQLQALPETEFVARWGKFGRR----LAGM-VHG 269
              PV  ++GIG   AA     GI T   L   P+       G  G R    L G  VH 
Sbjct: 178 KQTPVGDVWGIGRQYAALCGVNGIRTAFDLTLQPDGWIKKTMGAVGLRTVMELRGTPVHT 237

Query: 270 IDHRPVNPDRPAKSVSTETTFARDIRDAKALTEALPPLAEGVARRLERVNLAGRTVVLKL 329
           +D  P +      S S    F   + + + + +A+   A   A ++    L    V +  
Sbjct: 238 LDTAPSDKHTTCCSRS----FGASVTEFEQVHDAVMTFASRAAEKIRGEGLVSGAVQVFA 293

Query: 330 KTADFK------VITRHLRLPDPTGRAETIVRAGL-ALLERQMDGRAFRLLGIGVTDLCP 382
            T  F+       +   +RL  PT     I+ A L  L     DG  ++  G+ + DL  
Sbjct: 294 YTDRFRPDQPQFSLNSMIRLSPPTSSTPHIIGAALKGLKSAWRDGYEYKKAGVIMLDLVR 353

Query: 383 AEEADPPDLF 392
            E+  P DLF
Sbjct: 354 PEDI-PRDLF 362