Pairwise Alignments

Query, 393 a.a., DNA polymerase IV from Magnetospirillum magneticum AMB-1

Subject, 422 a.a., DNA polymerase V subunit UmuC (NCBI) from Escherichia coli BW25113

 Score = 71.6 bits (174), Expect = 4e-17
 Identities = 89/335 (26%), Positives = 141/335 (42%), Gaps = 30/335 (8%)

Query: 49  DCDAFYASVEKRDNPALADKPVIVGHPGGRGVVTTACYVARKFGPRSAMPMFKALELCPH 108
           D +AFYAS E    P L  KPV+V      G V      A+  G +   P FK  +L   
Sbjct: 6   DVNAFYASCETVFRPDLWGKPVVV-LSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRR 64

Query: 109 AVVI--PPNIAKYKQVSAQIRALFEKATPLVEPLSLDEAYLDLSPGVR----LVDRPAAV 162
             V+    N   Y  +S ++ +  E+ +P VE  S+DEA+ DL+ GVR    L D     
Sbjct: 65  CGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDLTD----- 118

Query: 163 LLARLARAIRLQ-VGITVSVGLSYNKFLAKMASDLNKPEGFSVIG------REEAEAFLA 215
              R  RA  LQ   +TV VG++  K LAK+A+   K       G       E     ++
Sbjct: 119 -FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177

Query: 216 PRPVTALFGIGAATAARMADQGITTIAQLQALPETEFVAR-WGKFGRRLAGMVHGIDHRP 274
             PV  ++GIG   + ++   GI T+  L A  +  F+ + +     R    + G     
Sbjct: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDL-ADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236

Query: 275 VNPDRPAK-SVSTETTFARDIRDAKALTEALPPLAEGVARRLERVNLAGRTVVLKLKTAD 333
           +    P K  +    +F   I D  ++ +A+   A   A +L   +   R +   +KT+ 
Sbjct: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296

Query: 334 FKV------ITRHLRLPDPTGRAETIVRAGLALLE 362
           F +       +  ++L  PT  +  I+ A    L+
Sbjct: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331