Pairwise Alignments

Query, 174 a.a., PAS domain-containing protein from Magnetospirillum magneticum AMB-1

Subject, 439 a.a., Methyl-accepting chemotaxis transducer/sensory box protein from Pseudomonas putida KT2440

 Score = 45.8 bits (107), Expect = 1e-09
 Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 1/85 (1%)

Query: 29  GRIIYANEVFLRMAGFSEAEILNKPHSIIRHPDMPRCV-FKLLWDTIEAGKEIFAYVKNL 87
           G I+ ANE F +  G+S  E+  K H +   PD  +   ++ LW  +  GK I    + +
Sbjct: 43  GTILDANERFCQAMGYSADELRGKHHRLFCEPDYAKSAEYQQLWRELGQGKAISGTFERI 102

Query: 88  SKNGDHYWVLAHVTPTFDKSGNIVS 112
            K G   W+ A   P  D+   + S
Sbjct: 103 DKAGREVWLEASYMPVLDEHRQVTS 127



 Score = 35.8 bits (81), Expect = 1e-06
 Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 3/85 (3%)

Query: 28  KGRIIYANEVFLRMAGFSEAEILNKPHSI--IRHPDMPRCVFKLLWDTIEAGKEIFAYVK 85
           +GR+I AN+ FL   G+   E++ + H +  + H +     ++  W ++  G+      +
Sbjct: 164 QGRVIKANQNFLDTMGYRLDEVVGRHHGLFCLAH-ERESAQYREFWASLNRGEYHSHRFE 222

Query: 86  NLSKNGDHYWVLAHVTPTFDKSGNI 110
            ++K G   ++ A   P FD  G +
Sbjct: 223 RVNKQGQTVFLEASYNPIFDSKGRL 247