Pairwise Alignments

Query, 703 a.a., flagellar biosynthesis protein FlhA from Magnetospirillum magneticum AMB-1

Subject, 697 a.a., type III secretion protein HrpI from Pseudomonas simiae WCS417

 Score =  335 bits (858), Expect = 6e-96
 Identities = 229/694 (32%), Positives = 373/694 (53%), Gaps = 39/694 (5%)

Query: 23  ARRGDVGLAFGIIVIVMMLILPLPPWLLDIGLALSLTIAVLILMVAIFIEKPLQFSSFPT 82
           A+R +V  A  ++ IV + I+PLP WL+DI +AL++ I+ L++++A+++  PL FSSFP+
Sbjct: 15  AQRAEVLGAVVVMAIVFIFIVPLPTWLVDILIALNICISCLLIVLALYLPGPLAFSSFPS 74

Query: 83  VLLLTTLIRLALNLASTRLILSHGHEGVEGAGQVIAAFASFIMSGSFVIGIIVFAILVIV 142
           +LLLTT+ RLAL++A+TRLIL       + AG ++ AF +F++ G+  +G+++F IL +V
Sbjct: 75  ILLLTTMFRLALSIATTRLILLE-----QDAGHIVEAFGNFVVGGNLAVGMVIFLILTLV 129

Query: 143 NFVVITKGSTRIAEVAARFTLDAMPGKQMAIDADLSAGLCDEPTARKRRAELEGESAFFG 202
           NF+VITKGS R+AEVAARF+LDAMPGKQM+ID+DL AGL D   AR +R +L  ES  FG
Sbjct: 130 NFLVITKGSERVAEVAARFSLDAMPGKQMSIDSDLRAGLIDGMQARDKREQLSRESQLFG 189

Query: 203 AMDGASKFVRGDAVAGLMITAINVIGGMIIGMAQQGLTFSQAAEFYTKLTVGDGLVTQVP 262
           AMDGA KFV+GDA+AGL+I  +N++GG   GM Q GL+ S++   Y+ LT+GDGL+ Q+P
Sbjct: 190 AMDGAMKFVKGDAIAGLIIVVVNLLGGFSTGMFQHGLSASESISLYSVLTIGDGLIAQIP 249

Query: 263 ALIVSVSAGMLVTKAGVQ-----EAVDRALFSQLAGYPRAVGMAGALMTLMALVPNMPFL 317
           AL++S++AGM++T+           +   +  Q+   P++  +A   M   A+VP MP  
Sbjct: 250 ALLISLTAGMIITRVAPDGRRGASNMGAEIARQMTSEPKSWMIASVGMLAFAVVPGMPTG 309

Query: 318 PFFLLGLGMGASAYLLDRDQRAKAEQQQQAEVAEAMQQAPVPEEPISSALK-IDHVRLEL 376
            F L+ L  G+  Y L R +  + ++Q  AE AEA++    PEE  S  L+  D  R  L
Sbjct: 310 VFILIALVTGSLGYYLMRQR--QRQEQPAAETAEAVR----PEENGSEDLRGFDPSRPYL 363

Query: 377 GYGLLQLINTPKGQRLTDQIKSLRRAIATEMGFVMP--SVRIQDNMQLPANTYVIH---- 430
                 +  TP+   L   I+  R A+   +G  +P   V + D++      + +H    
Sbjct: 364 LQFSPVIRGTPEVADLVHSIRQARNALVANIGLTLPPFEVELDDSLADDEMRFCVHEVPM 423

Query: 431 VKEVEAGRGDLRPAALLIMDPRGEDITLPGEKTREPTFGLPAMWIDPTN--REEALFRGY 488
           VK        +   AL +         + G   R+    L   W+ P +   ++     +
Sbjct: 424 VKASVVSHVAVERKALSVEPAH----AIAGLVERDEQDWL---WLAPDDPLLDDPQLERF 476

Query: 489 TVVDPPTVITTHLTEVIKDNMSELLSHAETQKLLDELDKEHQKLIAELIPSQMTIGGLQR 548
           T     ++I   + + +  +  + L   E++ +L  L+    +L+ EL    M +     
Sbjct: 477 TAA---SLIVERMKQAMMLSGPQFLGIQESKSILSWLEHNQPELVQEL-QRIMPLSRFSA 532

Query: 549 VLQNLLGERISIRDLPTILEGIAEACGHTRNVTMITEHVRARLARQISDNNTGPQGFIPL 608
           VLQ L  E + +R +  I+E + E   H R    + ++ R  L  QI    +   G    
Sbjct: 533 VLQRLASEGVPLRAVRLIVESLIEYGQHEREPDALADYARIALKAQIYHQYSEADGLHAW 592

Query: 609 ITLSPEWEQAFAESLVGTGEEKQISMAPSQLQDFISRTRQTFERFAMQGETPILLTSPMV 668
           + LSP+ E    E+L  T      ++        +S   Q F     + ++ +L+   + 
Sbjct: 593 L-LSPQTENILREALRQTQTGVFFALDDEHSAVLVSLLNQAFP-VRPKLKSVMLVAQDLR 650

Query: 669 RPYVRSIVERFRPMTVVMSQSEIHPKARIKTLGQ 702
            P    ++E F  +  V+S +E+   +++K LG+
Sbjct: 651 SPLRTLLLEEFNHVP-VLSFAELGSASKVKVLGR 683