Pairwise Alignments

Query, 263 a.a., exodeoxyribonuclease III from Magnetospirillum magneticum AMB-1

Subject, 265 a.a., exonuclease III from Agrobacterium fabrum C58

 Score =  132 bits (333), Expect = 6e-36
 Identities = 91/272 (33%), Positives = 139/272 (51%), Gaps = 22/272 (8%)

Query: 1   MRLVTWNINSIRLRIDLLRQVASVMNPDIICLQEIKVDDPLFPLDACREMGFGHVAFHGM 60
           M++ TWNIN ++ RI+ L Q     +PDI+CLQEIK  D  FP      +G+ H+  HG 
Sbjct: 1   MKIATWNINGVKARIENLCQWLKDSSPDIVCLQEIKSVDEGFPRLEIEALGY-HIETHGQ 59

Query: 61  KGYNGVAILSRL-PIAEARPLSRCGRDDRRHLMA---RLENG-VEVHCLYIPAGGDIPDP 115
           KG+NGVA+LS++ P    R L     D++   +     +E G + V  LY+P G    DP
Sbjct: 60  KGFNGVALLSKVKPDEVNRGLPGDDADEQARFIEGVFSVEGGAIRVCSLYLPNGNPPDDP 119

Query: 116 ETNDKFAHKLDFVREITAWAAAEFTPDSRAILAGDFNIAPLEAD-----VWSHKQLLKVV 170
               K+ +KL ++  +  +A      +   ILAGD+N+ P   D     VW    L   +
Sbjct: 120 V---KYPYKLAWMERLRRFAEDRLAMEEPLILAGDYNVIPEPFDCHDPRVWEGDALF--L 174

Query: 171 SHTPVEVELLNAFQASVPFVDAMRHFVPPEEKLFTWWSYRSPDWQKNDRGRRLDHVWVTP 230
             T      L     ++ F DA R        L+++W Y++  W KN+ G R+DH+ ++ 
Sbjct: 175 PKTRAAFRKLE----NLGFTDAAR-ATTDAAGLYSFWDYQAGAWPKNN-GIRIDHLMLSA 228

Query: 231 ALVPSLRGMLVAREARSWEQPSDHVPVMVDFD 262
                L+ + + +  R+WE+PSDHVPV   FD
Sbjct: 229 EAADRLQSVEIEKHVRAWEKPSDHVPVCGYFD 260