Pairwise Alignments

Query, 295 a.a., ribose ABC transporter substrate-binding protein RbsB from Serratia liquefaciens MT49

Subject, 309 a.a., ABC transporter, substrate binding protein (ribose) from Agrobacterium fabrum C58

 Score =  155 bits (392), Expect = 1e-42
 Identities = 96/298 (32%), Positives = 162/298 (54%), Gaps = 3/298 (1%)

Query: 1   MKMKKLAILASAFALSATLSANALAKDTIALVVSTLNNPFFVSMKEGAQQEANKLGYNLV 60
           MK  ++ + ++A    +  SANA     I L V+ L   FF  +K+  + EA   G  +V
Sbjct: 1   MKFSRILLTSAALLALSLGSANAAEVKKIGLAVANLQANFFNQIKQAVEAEAKTRGIAVV 60

Query: 61  VLDSQNNPAKELANVQDLMVQAPKLLLINPTDSDAVGNAIKMANQAKIPVITLDRVASKG 120
            +D++ +   ++  +QDL+ Q    L+  P  + A    +K+A  A +PVI +DR A   
Sbjct: 61  TVDAKGDGPTQVNQIQDLLTQNIDALIYIPAGAAAATVPVKLAKAAGVPVINIDRNADGA 120

Query: 121 DVVSHIASDNRVGGKMAGDFIAKKVGADAKVIQLEGIAGTSAARERGEGFKQSLDQNK-F 179
              + +A+D+    K   D+I K+ G   K++ + G  GT+   +R +G  +S+  N   
Sbjct: 121 PGDTFLATDSVASAKSVCDYIIKQAGGAGKMVIIHGQKGTTPEVDRTKGCMESVKANSGV 180

Query: 180 KLLASQPAD-FDRTKGLNVMQNLLTAHPDVQAVFAQNDEMALGALRALQTAGKTDVVVV- 237
           K++A Q ++ + + +G  +MQN+L A+PDV  VFAQ D +ALGA +A++ A  +  +VV 
Sbjct: 181 KIVAEQWSNMWSQDEGFQIMQNMLQANPDVSIVFAQADGLALGAAQAIKVANPSQKIVVG 240

Query: 238 GFDGTADGVKAVEGGKLAATVAQRPDQIGVIGVETADKVLKGEKVSATIPVDLKLVTQ 295
           GFDG    ++A++ G    T  Q+  ++G + VE A K++ GEKV A    D  L T+
Sbjct: 241 GFDGDTAALEALKNGVFDVTATQQTQKMGRMAVEMAVKIVGGEKVPAVQLSDATLTTK 298