Pairwise Alignments

Query, 269 a.a., bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase from Serratia liquefaciens MT49

Subject, 279 a.a., bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase from Magnetospirillum magneticum AMB-1

 Score =  213 bits (541), Expect = 5e-60
 Identities = 130/279 (46%), Positives = 162/279 (58%), Gaps = 10/279 (3%)

Query: 1   MPELPEVETSRRGIEPYLVGHSIQYAVVRNARLRWPVSEQILA-LSDQPVRSVQRRAKYL 59
           MPELPEVET  RG+     G        R A LR P  +     L+ + V +V RRAKYL
Sbjct: 1   MPELPEVETVARGLAQVWDGRRFVSVETRRAGLRVPFPKDFARRLTGRTVEAVGRRAKYL 60

Query: 60  LIELDHGWIIV-HLGMSGSLRMLAEETEA-GKHDHVDLVISNGMTLRYTDPRRFGAWLWC 117
           ++ LD G +++ HLGMSG + + A   E  G HDHV+ V   G+++  TDPRRFG +  C
Sbjct: 61  VVRLDGGLVMLGHLGMSGRMTIGALRNEPPGPHDHVEWVTDQGISVTLTDPRRFGLFALC 120

Query: 118 E--DLAASNVLAHLGPEPLSEAFNGAYLYEKSRSKRTLIKPWLMDNKLVVGVGNIYASES 175
           E  DL    +LA +GPEPL EAF+   L +    K   IK  L+D K+V G+GNIY  ES
Sbjct: 121 EASDLGGHPLLAGIGPEPLDEAFDAGVLAKALAGKTGPIKTVLLDQKVVAGLGNIYVCES 180

Query: 176 LFTAGILPDRPAGSLSKAEAELLAETIKAVLLRSIEQGGTTLRDFLQSDGKPGYFAQELQ 235
           LF A I P RPAGSLS+AE   L   IKAVL  ++  GG+TLRD  + DG+ GYF    Q
Sbjct: 181 LFRAEISPLRPAGSLSRAEVGRLVPLIKAVLSEAVAAGGSTLRDHARPDGELGYFQHSFQ 240

Query: 236 VYGRAGEPCRAC-GTP----IESAKHGQRSTFFCRRCQR 269
           VYGR GE C  C G P    I       RSTF+C + QR
Sbjct: 241 VYGREGETCPGCPGAPACGGILRMTQAGRSTFYCAKRQR 279