Pairwise Alignments

Query, 342 a.a., DNA-binding transcriptional regulator CytR from Serratia liquefaciens MT49

Subject, 340 a.a., LacI family DNA-binding transcriptional regulator from Pseudomonas fluorescens SBW25

 Score =  214 bits (546), Expect = 2e-60
 Identities = 116/333 (34%), Positives = 196/333 (58%), Gaps = 6/333 (1%)

Query: 9   MATMKDVAEMAGVSTATVSRALMNPEKVSTPTRQKVEQAVLAVGYSPHALSRNIKRNESR 68
           MAT+KDVA +AG+S  TVS  +     VS P R KVE A+  + Y P A++R++K   + 
Sbjct: 1   MATIKDVAALAGISYTTVSHVVNKTRPVSEPVRIKVEAAIKQLDYVPSAVARSLKAKTTA 60

Query: 69  TILVIVPDICDPFFADVIQGIEQTAAQQGYLVLIGDCAQQNQQERTFVNLIITKQIDGML 128
           TI ++VP+  +P+FA++ +GIE    + GY V++ +     +++R+++ +++ K+IDG++
Sbjct: 61  TIGLLVPNSLNPYFAELARGIEDYCERNGYCVILCNSDDNAEKQRSYLRVLLEKRIDGLI 120

Query: 129 LL---GSNLPFDASKEEQRNLPPMVMANEFAPELELPTVHIDNLTAAFEAVHYLHQLGHK 185
           +    G +    A     R   PMV+ +     +++  V ID+   A+ A  +L +LGH+
Sbjct: 121 VTSVGGDDSGLAAGLSAVRT--PMVIVDRALDGIDVDLVRIDHEEGAYLATRHLLELGHR 178

Query: 186 QIACVAGPEQMPLSHYRLQGYIQALRRNGISVESSYITRGDFTYEAGAQALAALMAQPKP 245
            IAC+ GP    ++  RL GY +AL+  G++V ++     DFT   G  A   L+A   P
Sbjct: 179 DIACIGGPAHTRVAQMRLAGYHRALQEAGVAVAANRTQESDFTSTGGYTAAVQLLAN-NP 237

Query: 246 PTAVFCHSDVMAIGVLSQAKKMGLRVPQDLSIVGFDDIKLAQYCDPPLTTVAQPRYQIGQ 305
           P+A+F  +D++  GVL  A +  +RVP +LS++GFDDI++ +Y  P LTTV Q   Q+G+
Sbjct: 238 PSAIFASNDMIGFGVLRAAAERNIRVPGELSVIGFDDIQMGRYVYPALTTVGQSIVQLGE 297

Query: 306 QAMLLLLEQLHGQNVASGSRLLDSELIIRGSTA 338
            A  LLL ++    +    R++   +++R STA
Sbjct: 298 TAAELLLRRIATPQLPIDQRIVTPSIVLRESTA 330