Pairwise Alignments

Query, 299 a.a., HTH-type transcriptional activator IlvY from Serratia liquefaciens MT49

Subject, 296 a.a., DNA-binding transcriptional activator of 3-phenylpropionic acid catabolism (NCBI) from Escherichia coli BW25113

 Score = 94.0 bits (232), Expect = 4e-24
 Identities = 72/248 (29%), Positives = 123/248 (49%), Gaps = 9/248 (3%)

Query: 1   MDLRDLKLFLHLAESHHFGRTAKAMHVSPSTLSRQIQRLEEILGQPLFLRDNRTVQLTDA 60
           M+LR L+ F+ +A++ +F R A+ +H S  +LS QI+ LE  +G PL +RD R V LT A
Sbjct: 1   MELRHLRYFVAVAQALNFTRAAEKLHTSQPSLSSQIRDLENCVGVPLLVRDKRKVALTAA 60

Query: 61  GEQLKDFAQQTLLQYQQLKHSLGQHGPSLSGELRLFCSV--TAAYSHLPPILDRFRAQHP 118
           GE    F Q  L   +Q +++  +    +  + +L      +A  + LP +L  FR + P
Sbjct: 61  GE---CFLQDALAILEQAENAKLRARKIVQEDRQLTIGFVPSAEVNLLPKVLPMFRLRQP 117

Query: 119 LVEIKLTTGDAADAVDKVQSNEADLGIAGRPETLPTSVAFTKIGEIPLVLIAPA-LPCAV 177
              I+L +       +K++  E D+G+   P   P  + + ++ + PLV++ P   P A 
Sbjct: 118 DTLIELVSLITTQQEEKIRRGELDVGLMRHPVYSP-EIDYLELFDEPLVVVLPVDHPLAH 176

Query: 178 RSQAFAEQPDWANIPFILPEH-GPSRKRIELWFRRQRIANPLIYATVGGHEAIVSMVALG 236
             +  A Q D  N     P + G     ++ WF ++  + P I          +++V +G
Sbjct: 177 EKEITAAQLDGVNFVSTDPVYSGSLAPIVKAWFAQEN-SQPNIVQVATNILVTMNLVGMG 235

Query: 237 CGIALIPG 244
            G+ LIPG
Sbjct: 236 LGVTLIPG 243