Pairwise Alignments

Query, 177 a.a., hypothetical protein from Serratia liquefaciens MT49

Subject, 798 a.a., tetratricopeptide repeat protein from Magnetospirillum magneticum AMB-1

 Score = 40.4 bits (93), Expect = 8e-08
 Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 2/87 (2%)

Query: 64  RTNYAYALAKSGRYQEALDVLNTLKD--PNTAVALNYRGYATRKLGRTDEGIGYYLKSVA 121
           R N   A   +GR  EA+D      +  P  A A    G A    GR  + +G + +++A
Sbjct: 141 RCNLGLACRAAGRLDEAIDAFAKAAELAPALAKAHGNLGGALFAAGRWADAVGAWGRALA 200

Query: 122 LDPKYPKVREYLGEAYMIKGRQDLAKE 148
           L+P + +VR  +G A    GRQ+ A E
Sbjct: 201 LEPNHAEVRADMGVALAKLGRQEEAAE 227



 Score = 36.6 bits (83), Expect = 1e-06
 Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 3/91 (3%)

Query: 66  NYAYALAKSGRYQEALDVLNTLK--DPNTAVALNYRGYATRKLGRTDEGIGYYLKSVALD 123
           N   AL  +GR+ +A+         +PN A      G A  KLGR +E    + +++ LD
Sbjct: 177 NLGGALFAAGRWADAVGAWGRALALEPNHAEVRADMGVALAKLGRQEEAAECFRRAMELD 236

Query: 124 PKYPKVREYLGEAYMIKGR-QDLAKEQLKVI 153
           P  P     LG A    GR +D A+   KVI
Sbjct: 237 PGNPAHGYNLGRALQDLGRLEDAAEIYAKVI 267



 Score = 32.7 bits (73), Expect = 2e-05
 Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 2/108 (1%)

Query: 66  NYAYALAKSGRYQEALDVLNTLKD--PNTAVALNYRGYATRKLGRTDEGIGYYLKSVALD 123
           N+A  L  +GR  E+      L+D  P+ A      G      GR DE I ++ + +AL 
Sbjct: 75  NFALVLQAAGRLPESEREFGRLRDREPDRAEHRFGLGLVVSAQGRFDEAISHFQEGLALA 134

Query: 124 PKYPKVREYLGEAYMIKGRQDLAKEQLKVIQSLCGTGCEEYRDLAAAI 171
            +  + R  LG A    GR D A +       L     + + +L  A+
Sbjct: 135 SQDVEARCNLGLACRAAGRLDEAIDAFAKAAELAPALAKAHGNLGGAL 182



 Score = 28.9 bits (63), Expect = 2e-04
 Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 2/88 (2%)

Query: 66  NYAYALAKSGRYQEALDVLNTL--KDPNTAVALNYRGYATRKLGRTDEGIGYYLKSVALD 123
           N   AL   GR ++A ++   +    P+ A A    G   +KLG+ D+ +  Y + + LD
Sbjct: 245 NLGRALQDLGRLEDAAEIYAKVIAVAPDHASAHMNSGVIFKKLGQPDQAVASYDRVLELD 304

Query: 124 PKYPKVREYLGEAYMIKGRQDLAKEQLK 151
           P         G+A    GR + A +  +
Sbjct: 305 PANGPAWLNRGKALYEAGRVEDALDSFR 332