Pairwise Alignments

Query, 327 a.a., substrate-binding domain-containing protein from Serratia liquefaciens MT49

Subject, 327 a.a., predicted sugar transporter subunit: periplasmic-binding component of ABC superfamily (NCBI) from Escherichia coli BW25113

 Score =  442 bits (1138), Expect = e-129
 Identities = 223/319 (69%), Positives = 262/319 (82%), Gaps = 3/319 (0%)

Query: 9   VLLAITGGLIIFSAGAQAKNDKTAIGAIYLDTQGYYAGVRWGVQDGAAKDKGKIEIIETN 68
           +L+A   G  +F   A+A   +  IGAIYLDTQGYYAGVR GVQD A     ++++IETN
Sbjct: 12  LLMATLLGSALF---ARAAEKEMTIGAIYLDTQGYYAGVRQGVQDAAKDSSVQVQLIETN 68

Query: 69  AQGDVSKESSFIDTMIARDVNAIVLSAVSVNGSVRAIKRANEASIPVICYNTCINEKGVD 128
           AQGD+SKES+F+DT++AR+V+AI+LSAVS NGS R ++RA+EA IPVICYNTCIN+KGVD
Sbjct: 69  AQGDISKESTFVDTLVARNVDAIILSAVSENGSSRTVRRASEAGIPVICYNTCINQKGVD 128

Query: 129 KYVYAYLVGDPYEFGKKLGNTAADYFIEKKITEPAIAVINCEAFEVCVQRRKGFEEALKA 188
           KYV AYLVGDP EFGKKLGN AADYFI  KI +P IAVINCEAFEVCVQRRKGFEE LK+
Sbjct: 129 KYVSAYLVGDPLEFGKKLGNAAADYFIANKIDQPKIAVINCEAFEVCVQRRKGFEEVLKS 188

Query: 189 KVPGMKIVANQEGTVLDKAISVGEKLLISSGKVDAIFGESGGATLGAVKAVRNQNKVGQT 248
           +VPG +IVANQEGTVLDKAISVGEKL+IS+  ++AI GESGGATLGAVKAVRNQN+ G+ 
Sbjct: 189 RVPGAQIVANQEGTVLDKAISVGEKLIISTPDLNAIMGESGGATLGAVKAVRNQNQAGKI 248

Query: 249 VVFGSDMTTEIAQELVNRQVLQAVVDISGKKMGALVFTQAMNAINQRPVGQKVVQVPIDL 308
            VFGSDMTTEIAQEL N QVL+AVVDISGKKMG  VF Q +  IN++  G+KV+QVPIDL
Sbjct: 249 AVFGSDMTTEIAQELENNQVLKAVVDISGKKMGNAVFAQTLKVINKQADGEKVIQVPIDL 308

Query: 309 YASSQSATDWLTTHKDGLP 327
           Y  ++    WL TH DGLP
Sbjct: 309 YTKTEDGKQWLATHVDGLP 327