Pairwise Alignments

Query, 305 a.a., transcriptional regulator GcvA from Serratia liquefaciens MT49

Subject, 299 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  182 bits (463), Expect = 6e-51
 Identities = 104/292 (35%), Positives = 158/292 (54%), Gaps = 6/292 (2%)

Query: 1   MSKRLPPLNALRVFDAAARHLSFTKAAEELFVTQAAVSHQIKSLEDFLGLKLFRRRNRSL 60
           M +++P   AL  F+AAARH SFTKAA EL +TQ A+  QI SLE+FL ++LFRR  R +
Sbjct: 1   MRRKIPSTTALVSFEAAARHESFTKAAHELSITQGAICRQIASLEEFLSVELFRRSRRGV 60

Query: 61  LLTEEGQSYYLDIKEIFSSINEATRKLQARSAKGALTVSLPPSFAIQWLVPRLSGFNSAY 120
            LTE G SY   +     ++   T  +  +     + +++ P+F  QWL+PRL  F   +
Sbjct: 61  KLTEAGLSYSRRVATQLDAVERDTLSVMGQQGANTIELAVVPTFGTQWLIPRLKDFQRKH 120

Query: 121 PGIDVRIQAVDREEDKLADDVDVAIFYGRGNWTGLRAERLYAEYLLPVCSPSLLTGEHAL 180
           P + V +    R       + D AI++G  +W+G  + RL  E  +PVCSP LL      
Sbjct: 121 PEVTVNLTNRTRPFLFADTEFDAAIYFGDADWSGTESHRLMGENPVPVCSPRLLANTTQF 180

Query: 181 KMTSDLAYHTLLHDTSRRDWLAYTRQLGLQHINVQQ---GPIFSHSAMVVQAAVHGQGIA 237
               ++A   LL  T+R    A+ +    Q +N+ +   GP +   +M+ QAA+H  GIA
Sbjct: 181 S-PQEIAELPLLQQTTRP--YAWRQWFNAQQLNIPRDMTGPRYELFSMLSQAAMHDMGIA 237

Query: 238 LVNNVMAQTEIEAGRLVCPFNDVLVSKNAFYLVCHDSQAELGKIAAFRQWIL 289
           L+   + Q E+E G+LV    + L S  A+YL+  D + E   + AFR W++
Sbjct: 238 LIPPFLIQRELEEGQLVIASPEALSSSKAYYLMIPDRKVESASLHAFRDWLI 289