Pairwise Alignments

Query, 531 a.a., ABC transporter substrate-binding protein from Serratia liquefaciens MT49

Subject, 542 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  517 bits (1331), Expect = e-151
 Identities = 256/533 (48%), Positives = 356/533 (66%), Gaps = 11/533 (2%)

Query: 6   LTMTLGLLALAAMGGARASTLVYCSESSPEGFNPQLFTSGPTVDASSATIYNRLVDFKTG 65
           L ++ GL+A A    A A+ LV+CSE SP GF+P  +T+G   DAS+ T++NRL  F+ G
Sbjct: 9   LIVSAGLMAAAPFAQA-ATNLVFCSEGSPAGFDPGQYTTGTDFDASAETMFNRLTQFERG 67

Query: 66  TVELQPSLAESWQVSEDGKNYTFHLRKGVKFQSNKYFTPTRDFNADDVIFSFMRQKDANN 125
              + P LA SW VS DG  YTFHLR GVKF +  YF PTR FNADDV+F+F R  + ++
Sbjct: 68  GTAVIPGLATSWDVSPDGLTYTFHLRDGVKFHTTSYFKPTRTFNADDVLFTFNRMINKDD 127

Query: 126 PYHKVSNGAYTNFESMEFGTLINNIVKVDDNTVRFELSRAEAPFVADLGMYFATILSAEY 185
           P+ K     +  F  M   T I NI KVD++TV+F L   +A F+ +L M FA+I SAEY
Sbjct: 128 PFRKAYPTEFPYFTDMGMDTNIKNIEKVDEHTVKFTLGTVDAAFIQNLAMSFASIQSAEY 187

Query: 186 ADAMLKAGTPQRVDNDPIGTGPFQLVQYQKDAKILYKAFDHYWEGKP-KVDRLVFSITPD 244
           A  +LK G P  ++  PIGTGPF    YQKD+ I Y     YW+ +  K+D L+F+IT D
Sbjct: 188 AAQLLKEGKPADINQKPIGTGPFVFKSYQKDSNIRYTGNKDYWKPEDVKIDNLIFAITTD 247

Query: 245 AAVRYAKLQKNECQVMPFPNPADLTRMRQDPNIQVMEKSGLNIGFLAFNT--------QK 296
            +VR  KL+KNECQ+  FP PADL  +  D ++++  ++G N+G++A+N         Q 
Sbjct: 248 PSVRIQKLKKNECQITLFPRPADLKALGDDKDLKLPHQAGFNLGYIAYNVMDKVKGSDQP 307

Query: 297 KPLDNVKVRQALALAVNKPAILEAVFHGAGQPAKNLLPPTQWGSNDKIEDYPYSPEKAKK 356
            PL +++VRQAL ++VNK  I+++V+ GAGQ A N +PPTQW  +  I+D  Y PEKAK 
Sbjct: 308 NPLADLRVRQALDMSVNKQQIIDSVYQGAGQLAVNAMPPTQWSYDTTIKDAKYDPEKAKS 367

Query: 357 LLQEAGLGQGFAIDLWAMPVQRPYNPNAKRMAEMIQSDWAKIGVKAKIVTFEWGEYLQRI 416
           LL+EAG+ +G  I LWAMPVQRPYNPNAK MAEM+Q+DW KIG+  KI ++EWGEY++R 
Sbjct: 368 LLKEAGIKEGTEIVLWAMPVQRPYNPNAKLMAEMLQNDWKKIGLNVKITSYEWGEYIKRS 427

Query: 417 KNGEHQTALMGWTTANGDPDNFFGPLFTCVSANGGSNSAKWCYPPFDKLISQAREENDHA 476
           K GE+Q  ++GW+  NGDPDN+   LF C S + G+N +KWC   FD ++ +A+  +D A
Sbjct: 428 KGGENQAMIIGWSGDNGDPDNWLNVLFGCDSLS-GNNFSKWCDKKFDGIVKEAKATSDVA 486

Query: 477 KRVAMYEQAQVMMHDQMPALMIAHSTIFEPVRKEVKGYEIDPFGKHIFKQVSL 529
           KR  +Y+QAQ ++ D +P   IAHST+++P+R  V+ ++I PFG + F  VS+
Sbjct: 487 KRTELYKQAQHILKDAVPMTPIAHSTVYQPMRSTVQDFKISPFGLNSFYGVSV 539