Pairwise Alignments

Query, 257 a.a., helix-turn-helix transcriptional regulator from Serratia liquefaciens MT49

Subject, 288 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  134 bits (337), Expect = 2e-36
 Identities = 74/228 (32%), Positives = 123/228 (53%), Gaps = 6/228 (2%)

Query: 30  EFQPHRHSWGQLMWVKAGVMVLRIGGQRFLAPPEFVLWAPAEIEHSCYNQRLAQ--CRMV 87
           E  PH H  GQLM+   GV+  +I    ++ PP+  LW P  + H+      A+  C ++
Sbjct: 37  EHAPHSHRKGQLMYTLRGVIHCQIEAGIWIVPPQCALWIPGGLPHAARGSGEAEVYCLLI 96

Query: 88  DIALPLCAG-LPEEPCLVSVTPIFRAIAEDFYARKQYIPQSKQDLRLCRALIDQLHVSPV 146
           D   P  AG LP + C +SV+ +   +     +  Q   +     RL R L+D+L  +P+
Sbjct: 97  D---PDAAGALPAQCCTLSVSGLLHELISKAVSFPQLYDEDGAQGRLIRTLLDELAQAPI 153

Query: 147 QQTYLPTSEDKFLAPVLEALEHCPSDNTSLAIWATRVYTTERTLSRRCQQDLGMSFSEWR 206
           +  +LP   D  L  + ++L   P D  +L  WA R+  +ER+++R   ++ G+SF  WR
Sbjct: 154 EDLHLPMPRDPRLRRLADSLLADPGDKATLGQWAMRIGMSERSMTRLLLEEFGLSFGRWR 213

Query: 207 QRLRFLHAVSLLEQGKTVQEVALEVGYSSASAFIVMFQQIAGTTPERF 254
           ++L  + ++  L +G +VQ VAL++GY +AS FI MF++  G  P R+
Sbjct: 214 RQLHVILSLQRLARGDSVQRVALDLGYENASGFITMFRKAVGQPPARY 261