Pairwise Alignments

Query, 257 a.a., helix-turn-helix transcriptional regulator from Serratia liquefaciens MT49

Subject, 273 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  122 bits (305), Expect = 1e-32
 Identities = 69/223 (30%), Positives = 115/223 (51%)

Query: 34  HRHSWGQLMWVKAGVMVLRIGGQRFLAPPEFVLWAPAEIEHSCYNQRLAQCRMVDIALPL 93
           H H   QL++   GVMV+     ++  PP   +W PA   HS       + R V +    
Sbjct: 51  HSHEKHQLLYAIEGVMVVYSALNQWTVPPNRGIWMPAGQVHSLRCVGTLKMRSVFVRPDR 110

Query: 94  CAGLPEEPCLVSVTPIFRAIAEDFYARKQYIPQSKQDLRLCRALIDQLHVSPVQQTYLPT 153
              +P EP  VS++P+   + +   + K    +  +D R+   ++D+L + P     LP 
Sbjct: 111 FPNMPGEPKTVSISPLLSELIKASVSLKPPYAEDSRDARIMHLILDELAILPALPLSLPQ 170

Query: 154 SEDKFLAPVLEALEHCPSDNTSLAIWATRVYTTERTLSRRCQQDLGMSFSEWRQRLRFLH 213
             D  L  +  AL+  P D +++A W+ R+   ++T+ R  +++ GM+F +WRQ+ R L 
Sbjct: 171 PADPRLQRICLALQDEPGDASTVAHWSERLSLDQKTIQRLFRKETGMTFGQWRQQARLLL 230

Query: 214 AVSLLEQGKTVQEVALEVGYSSASAFIVMFQQIAGTTPERFRR 256
           A+  +  G+ V ++ALE+GY S SAF  MF++  G TP  F R
Sbjct: 231 ALERIAVGEKVIDIALELGYESPSAFTSMFKKQFGKTPSHFFR 273