Pairwise Alignments

Query, 257 a.a., helix-turn-helix transcriptional regulator from Serratia liquefaciens MT49

Subject, 273 a.a., putative DNA-binding transcriptional regulator from Escherichia coli BL21

 Score =  120 bits (301), Expect = 3e-32
 Identities = 70/222 (31%), Positives = 113/222 (50%), Gaps = 3/222 (1%)

Query: 34  HRHSWGQLMWVKAGVMVLRIGGQRFLAPPEFVLWAPAEIEHSCYNQRLAQCRMVDIAL-P 92
           H+H  GQL+    G +   +    ++ PP++ +W P  +EHS  NQ  A   +  + + P
Sbjct: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS--NQVTANAELCFLFIEP 93

Query: 93  LCAGLPEEPCLVSVTPIFRAIAEDFYARKQYIPQSKQDLRLCRALIDQLHVSPVQQTYLP 152
               +P   C + ++P+ R +      R           RL   L D+L   P QQ +LP
Sbjct: 94  SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIHVLFDELPQQPQQQLHLP 153

Query: 153 TSEDKFLAPVLEALEHCPSDNTSLAIWATRVYTTERTLSRRCQQDLGMSFSEWRQRLRFL 212
            S    +  ++E +   P +  SL  WA     +ER L+R   ++ G+SF +WRQ+L+ +
Sbjct: 154 VSSHPKIRAMVEMMAKEPVEWGSLGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213

Query: 213 HAVSLLEQGKTVQEVALEVGYSSASAFIVMFQQIAGTTPERF 254
            A+  L +G TVQ+VA  +GY S +AFI MF++  G TP R+
Sbjct: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255