Pairwise Alignments

Query, 273 a.a., tRNA pseudouridine(38-40) synthase TruA from Serratia liquefaciens MT49

Subject, 274 a.a., pseudouridine synthase from Pseudomonas simiae WCS417

 Score =  295 bits (755), Expect = 7e-85
 Identities = 145/259 (55%), Positives = 186/259 (71%), Gaps = 1/259 (0%)

Query: 13  KIALGIEYDGSRYYGWQRQQE-VASVQACLEQALSKVANAPINVLCAGRTDAGVHATGQV 71
           +IALG+EY GSRY GWQRQ   V +VQ  LE ALSKVA++P++++CAGRTDAGVHA GQV
Sbjct: 8   RIALGVEYKGSRYRGWQRQASGVLTVQETLENALSKVADSPVSLMCAGRTDAGVHACGQV 67

Query: 72  VHFETTAQRKDAAWTMGVNTHLPPDIAVRWVTGVPEDFHARFSATARRYRYIIYNHRYRP 131
           VHF+T A+R   AW MG N +LP D++V W   +P  FHARF A ARRYRY+IYN + RP
Sbjct: 68  VHFDTQAERSMKAWVMGANINLPHDVSVTWAKVMPAHFHARFKAIARRYRYVIYNDQIRP 127

Query: 132 AVLQQGMTHFYHPLDADRMERAAQALLGENDFTSFRAVQCQSRTPWRNVKHVKVTRHGEY 191
           A L + +T  + PLDA+RM  AAQ L+G +DF++FRA QCQ+++P + V H++VTRHG+ 
Sbjct: 128 AHLNEEITWNHRPLDAERMAEAAQHLVGVHDFSAFRAGQCQAKSPIKEVHHLRVTRHGKM 187

Query: 192 IVVDIKANAFVHHMVRNIVGSLMEIGCGNQDENWMAELLALKDRNLAAATARAEGLYLVS 251
           IV+DI+A AF+HHMVRNI G LM IG G +   W  E+L  + R     TA   GLYLV 
Sbjct: 188 IVLDIRAGAFLHHMVRNIAGVLMTIGTGERPVEWAKEVLESRVRRTGGVTAHPFGLYLVD 247

Query: 252 VDYPEHFALPRPPMGPLFL 270
           V+Y + F LP   +GP FL
Sbjct: 248 VEYRDEFELPERFIGPHFL 266