Pairwise Alignments

Query, 234 a.a., ABC transporter permease from Serratia liquefaciens MT49

Subject, 229 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  158 bits (400), Expect = 7e-44
 Identities = 95/208 (45%), Positives = 127/208 (61%), Gaps = 2/208 (0%)

Query: 22  GVAVTLWLLISSVVMGGLLAIPMAVARVSSISWVRFPVWLYTYIFRGTPLYVQLLVFYSG 81
           G  +TL L+  +V+ G LLAIP+ +AR S   +V    + Y + FRGTPL VQL + Y G
Sbjct: 16  GAILTLELVAIAVIAGLLLAIPLGIARSSRRWYVSALPYAYIFFFRGTPLLVQLFLVYYG 75

Query: 82  MYSLEIVRGTDFLNAFFRSGLNCTILALTLNTCAYTTEIFAGAIRAVPHGEIEAANAYGF 141
           +   + VR + F+  + R    C    +TL+T AY  EI  GAI+A+P GEIEAA A G 
Sbjct: 76  LAQFDSVRES-FMWPYLRDPFWCATATMTLHTAAYIAEILRGAIQAIPPGEIEAARALGM 134

Query: 142 SRFKMYRCIILPSALRTALPAYSNEVILMLHSTALAFTATVPDLLKIARDINAATYQPFY 201
           S+ K    IILP A R  LPAYSNEVILML ++ALA T T+ +L  +AR I A TY P  
Sbjct: 135 SKPKTLFYIILPRASRIGLPAYSNEVILMLKASALASTVTLLELTGMARTIIARTYLPVE 194

Query: 202 AFGIAAVLYLIISYGLISLFRKAEKRWM 229
            F  A + YL+++Y L+  F+  E RW+
Sbjct: 195 IFFAAGLFYLLMAYVLVRGFKLLE-RWL 221