Pairwise Alignments

Query, 216 a.a., transcriptional regulator RcsB from Serratia liquefaciens MT49

Subject, 221 a.a., DNA-binding response regulator from Magnetospirillum magneticum AMB-1

 Score =  111 bits (278), Expect = 9e-30
 Identities = 66/202 (32%), Positives = 108/202 (53%), Gaps = 7/202 (3%)

Query: 4   LNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLSKLDANVLITDLSMPGDK 63
           +  ++ DDH IV   IR++LE + W++VVGE +D  A ++ +     +++I DLSMPG  
Sbjct: 12  VRTVLVDDHGIVRTAIRRALEGMAWIDVVGEADDGVAALHLIDDAKPDLIILDLSMPG-- 69

Query: 64  YGDGITLIKYIKRHYPQLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123
             DG+ +I  +KR  P   I+VLT   +   +     L ++   LK G   DL  A+   
Sbjct: 70  -LDGMDIIPLVKRRNPASRIVVLTGTQDGTTMKRAFALGVDAYTLKTGGWQDLETAIGEA 128

Query: 124 QKGKKFTPESVSKLL----ERISASGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179
             G+++   S   ++    E   A+G     LS +E +VL+L AEG+   ++A  L  S+
Sbjct: 129 MAGRRYISPSAGLVVDGGEEGGLAAGSAVAPLSGRERQVLKLLAEGYTNQKVAGILGISV 188

Query: 180 KTISSQKKSAMMKLGVENDIAL 201
           KT+   +++ M KLGV   +AL
Sbjct: 189 KTVDRHRENIMNKLGVRTPVAL 210