Pairwise Alignments

Query, 364 a.a., microcin C ABC transporter permease YejB from Serratia liquefaciens MT49

Subject, 364 a.a., predicted oligopeptide transporter subunit (NCBI) from Escherichia coli BW25113

 Score =  607 bits (1565), Expect = e-178
 Identities = 302/364 (82%), Positives = 325/364 (89%), Gaps = 1/364 (0%)

Query: 1   MAAYLIRRLLLIIPTLWAIITINFFIVQIAPGGPVDQAIATIEMGQSSGF-GGGGTGDGL 59
           M AYLIRRLLL+IPTLWAIITINFFIVQIAPGGPVDQAIA IE G +    G GG G   
Sbjct: 1   MGAYLIRRLLLVIPTLWAIITINFFIVQIAPGGPVDQAIAAIEFGNAGVLPGAGGEGVRA 60

Query: 60  GHARTGVASATDSQYRGSRGLDPEVIAEITKRYGFDKPLHERYFTMLWNYMRLDFGDSLF 119
            HA+TGV + +DS YRG RGLDPEVIAEIT RYGFDKP+HERYF MLW+Y+R DFGDSLF
Sbjct: 61  SHAQTGVGNISDSNYRGGRGLDPEVIAEITHRYGFDKPIHERYFKMLWDYIRFDFGDSLF 120

Query: 120 RGASVMQLVGHSLPVSITLGLWSTLIIYLVSIPLGIRKAVHNGSAFDTWSSTLIIIGYAI 179
           R ASV+ L+  SLPVSITLGLWSTLIIYLVSIPLGIRKAV+NGS FD WSS  IIIGYAI
Sbjct: 121 RSASVLTLIKDSLPVSITLGLWSTLIIYLVSIPLGIRKAVYNGSRFDVWSSAFIIIGYAI 180

Query: 180 PAFLFAILMIVLFAGGSYLDWFPLRGLVSSNFDTLPWYSKITDYLWHITLPVLATVIGGF 239
           PAFLFAIL+IV FAGGSY D FPLRGLVS+NFD+LPWY KITDYLWHITLPVLATVIGGF
Sbjct: 181 PAFLFAILLIVFFAGGSYFDLFPLRGLVSANFDSLPWYQKITDYLWHITLPVLATVIGGF 240

Query: 240 ATLTMLTKNSFLDEIRKQYVVTARAKGLDENKILYRHVFRNAMLLVIAGFPATFVSMFFT 299
           A LTMLTKNSFLDE+RKQYVVTARAKG+ E  IL++HVFRNAMLLVIAGFPATF+SMFFT
Sbjct: 241 AALTMLTKNSFLDEVRKQYVVTARAKGVSEKNILWKHVFRNAMLLVIAGFPATFISMFFT 300

Query: 300 GSLLIEVMFSLNGLGLLGYDATLQRDYPVMFGTLYIFTLIGLLLNILSDITYTLVDPRID 359
           GSLLIEVMFSLNGLGLLGY+AT+ RDYPVMFGTLYIFTLIGLLLNI+SDI+YTLVDPRID
Sbjct: 301 GSLLIEVMFSLNGLGLLGYEATVSRDYPVMFGTLYIFTLIGLLLNIVSDISYTLVDPRID 360

Query: 360 FEAR 363
           FE R
Sbjct: 361 FEGR 364