Pairwise Alignments

Query, 503 a.a., sugar ABC transporter ATP-binding protein from Serratia liquefaciens MT49

Subject, 494 a.a., sugar ABC transporter ATP-binding protein from Serratia liquefaciens MT49

 Score =  325 bits (832), Expect = 3e-93
 Identities = 186/492 (37%), Positives = 285/492 (57%), Gaps = 8/492 (1%)

Query: 6   PSRLEMRNISIAFAGFNALQNVDFTLQGGSTHALVGANGAGKSTLMAILSGAHDHYRGEI 65
           P  LE   IS  F G  AL  V   ++ GS HAL+G NGAGKSTLM  L G +    G I
Sbjct: 3   PYVLEAEGISKQFPGVKALDKVSIKIKPGSVHALMGENGAGKSTLMKCLIGIYHPDEGTI 62

Query: 66  FIDGQQVDIHSPLQARQYGIHVVQQEVDVALIPTLSVAENIMLDWLNEPGHL--LNWAQL 123
            I GQ V     LQA   GI ++ QE++  L+P ++VAENI L    EP  L  +N  QL
Sbjct: 63  KIKGQPVTFSDTLQALHSGISMIHQELN--LVPYMTVAENIWLG--REPAKLGFVNHDQL 118

Query: 124 YRQAAQLLTQLDLTINLRQRLSECTLAEKQQVLLARALSHRCRFLVLDEPTAPLDRAESE 183
            ++  +LL +L++ +     + E ++A +Q V +A+A+S+    L++DEPT+ L   E  
Sbjct: 119 NKKTRELLARLNIKLKPETLVGELSIASQQMVEIAKAVSYNADVLIMDEPTSALTEGEVV 178

Query: 184 RLFRVVRRLQSEGIGVVFISHRIHELSEICDRLTVLRDGRHVSEDAMQGLTGEQIVEKML 243
            LF ++R L+ +G G+++ISH++ E+  I D +++ RDG  ++ D  + LT + ++  M+
Sbjct: 179 HLFAIIRELREQGKGIIYISHKMDEIFAITDEVSIFRDGTFIASDKTENLTKQSLITMMV 238

Query: 244 GHRLDDIFPPPRPPHGSRPLLRVEGLHDRHKLRDVSLQLHQGEILGIAGLAGAGKTELCK 303
           G  L  +FP      G   +LRVEGL       DVS  + +GEILG+AGL GAG++E+ +
Sbjct: 239 GRELTQMFPKFNNNIGEE-VLRVEGLRRSDWFHDVSFSVKRGEILGVAGLVGAGRSEVME 297

Query: 304 ALFGASPARIERGELLGKPWAPRAPHLSVEQGLALVPEERRKEGIFIDEAIPMNLS-VSA 362
           +LFG  PA      + GK     +P  ++E GLA + E+R+K G+F+  ++  N+S V+ 
Sbjct: 298 SLFGMHPADGGSIFIEGKAAKVDSPSKAIELGLAFLTEDRKKSGLFLVLSVVENMSIVNL 357

Query: 363 DDSFSRWSLFSRRQELRWARDIMQRLNIRASGPQQKLARLSGGNQQKVAIGKWLRGDPSV 422
            +   +    S  Q  +   + +++LNI+     Q +  LSGGNQQKV I +WL   P +
Sbjct: 358 SEYIGKNGFVSHVQMAKDCMEQIKKLNIKTPTMDQIINNLSGGNQQKVLIARWLLAQPKI 417

Query: 423 LIFDEPTKGVDIKAKQELFTLIDGLARNGKGIIYASGEFSELVGLCDRICVLWDGRVVAE 482
           LI DEPT+G+D+ AK E++ LI  LA  G  II  S E  E++G+ DR+ V+  GR+   
Sbjct: 418 LILDEPTRGIDVGAKAEIYRLISELANRGVAIILVSSELPEILGMSDRVMVMHGGRITGI 477

Query: 483 LNAADIDEETLL 494
           L+  + D+E +L
Sbjct: 478 LDKEEADQEKIL 489



 Score = 78.6 bits (192), Expect = 5e-19
 Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 20/232 (8%)

Query: 275 LRDVSLQLHQGEILGIAGLAGAGKTELCKALFGASPARIERGELLGKP-------WAPRA 327
           L  VS+++  G +  + G  GAGK+ L K L G         ++ G+P        A  +
Sbjct: 21  LDKVSIKIKPGSVHALMGENGAGKSTLMKCLIGIYHPDEGTIKIKGQPVTFSDTLQALHS 80

Query: 328 PHLSVEQGLALVPEERRKEGIFIDEAIPMNLSVSADDSFSRWSLFSRRQELRWARDIMQR 387
               + Q L LVP     E I++    P  L     D  ++ +           R+++ R
Sbjct: 81  GISMIHQELNLVPYMTVAENIWLGRE-PAKLGFVNHDQLNKKT-----------RELLAR 128

Query: 388 LNIRASGPQQKLARLSGGNQQKVAIGKWLRGDPSVLIFDEPTKGVDIKAKQELFTLIDGL 447
           LNI+   P+  +  LS  +QQ V I K +  +  VLI DEPT  +       LF +I  L
Sbjct: 129 LNIKLK-PETLVGELSIASQQMVEIAKAVSYNADVLIMDEPTSALTEGEVVHLFAIIREL 187

Query: 448 ARNGKGIIYASGEFSELVGLCDRICVLWDGRVVAELNAADIDEETLLLYSTG 499
              GKGIIY S +  E+  + D + +  DG  +A     ++ +++L+    G
Sbjct: 188 REQGKGIIYISHKMDEIFAITDEVSIFRDGTFIASDKTENLTKQSLITMMVG 239