Pairwise Alignments

Query, 372 a.a., branched-chain amino acid ABC transporter substrate-binding protein from Serratia liquefaciens MT49

Subject, 378 a.a., branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein (braC-like) from Pseudomonas putida KT2440

 Score =  520 bits (1339), Expect = e-152
 Identities = 253/374 (67%), Positives = 302/374 (80%), Gaps = 2/374 (0%)

Query: 1   MSSKLIKSPLAALLIG-CLGSAFYAQADIVIGVAGPFSGPNATYGDQYWRGASQAAADIN 59
           MS    K    AL +   LG + Y QAD+ IGVAGP +G NA +G+QY +GA  AA  IN
Sbjct: 1   MSQTFYKKGFLALAVATALGVSSYVQADVKIGVAGPMTGANAAFGEQYMKGAQAAADKIN 60

Query: 60  AAGGIKGEKIKLVQGDDACEPKQAVSVANRLVDQDKVAAVVGHFCSSSTMPASEVYDEAG 119
           AAGG+ GEKI LV+GDDACEPKQAV+VANRLVDQDKV  VVGHFCSS+T+PASEVYDEAG
Sbjct: 61  AAGGVNGEKIVLVKGDDACEPKQAVAVANRLVDQDKVIGVVGHFCSSNTIPASEVYDEAG 120

Query: 120 IIAITPGSTNPQITERGMTNMFRMCGRDDQQGVIATNYMLNTLKAKRIAVIHDKDTYGQG 179
           +IAITPGSTNPQ+TERG++ MFRMCGRDDQQG++A +Y+++ LK K++AV+HDKDTYGQG
Sbjct: 121 VIAITPGSTNPQVTERGLSAMFRMCGRDDQQGIVAGDYIVDVLKGKKVAVLHDKDTYGQG 180

Query: 180 LADAARAEMNKRGVKEVLYEGLSRGEKDFNALVTKIASVKPDVVYFGGCHPEAGPLVRQM 239
           LADA +A++ KRGVK VLYEGL+RGEKDF+A+VTKI S   DVVYFGG HPEAGPLVRQ+
Sbjct: 181 LADATKAQLEKRGVKPVLYEGLTRGEKDFSAVVTKIRSTGADVVYFGGLHPEAGPLVRQL 240

Query: 240 REQGV-TAKFFSGDCIVTEELVTAAGGPQYTNGVLMTFGNDPRQIPEGKAVIAKFRASGF 298
           REQG+   KF S D IVT+ELV+ AGG QY +GV MTFG DPR +P+ KAV+ +FR +G 
Sbjct: 241 REQGLKDVKFMSDDGIVTDELVSTAGGAQYVDGVYMTFGADPRLLPDSKAVVEEFRKAGT 300

Query: 299 EPEGYTLYSYASIQAIAAAFNATGGKDSAKASEWLKSHDVDTVMGKKAWDKKGDLKVSDY 358
           EPEGYTLY+YAS+QA+AAAFN         A++WLK++ V TVMG+K WD KGDL VSDY
Sbjct: 301 EPEGYTLYAYASLQALAAAFNGAKSNKGEDAAKWLKANPVQTVMGEKKWDSKGDLTVSDY 360

Query: 359 VVYQWDDKGKYHQL 372
           VVYQWD  GKYHQL
Sbjct: 361 VVYQWDKTGKYHQL 374