Pairwise Alignments

Query, 372 a.a., branched-chain amino acid ABC transporter substrate-binding protein from Serratia liquefaciens MT49

Subject, 348 a.a., High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  281 bits (720), Expect = 1e-80
 Identities = 142/342 (41%), Positives = 212/342 (61%), Gaps = 4/342 (1%)

Query: 27  DIVIGVAGPFSGPNATYGDQYWRGASQAAADINAAGGIKGEKIKLVQGDDACEPKQAVSV 86
           DI + + G  SGP A +GD  + GA QA  DINA GGIKG+K+  V+ DDAC+PKQAV+V
Sbjct: 4   DIKVAIVGAMSGPVAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAV 63

Query: 87  ANRLVDQDKVAAVVGHFCSSSTMPASEVYDEAGIIAITPGSTNPQITERGMTNMFRMCGR 146
           AN++V+ D +  V+GH CSSST PAS++Y++ GI+ I+PG+TNP++T+RG   + R  G 
Sbjct: 64  ANKIVN-DGIQYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQYIMRTAGL 122

Query: 147 DDQQGVIATNYMLNTLKAKRIAVIHDKDTYGQGLADAARAEMNKRGVKEVLYEGLSRGEK 206
           D  QG  A  Y+L T+K +RIA+IHDK  YG+GLA + +  + +     V ++G++ GEK
Sbjct: 123 DSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKQGNANIVFFDGITAGEK 182

Query: 207 DFNALVTKIASVKPDVVYFGGCHPEAGPLVRQMREQGVTAKFFSGDCIVTEELVTAAGGP 266
           DF+AL+ ++     D VY+GG +PE G ++RQ R  G+  +F   + +    L   AGG 
Sbjct: 183 DFSALIARLQKENIDFVYYGGYYPEMGQMLRQARANGLKTQFMGPEGVGNASLSNIAGGA 242

Query: 267 QYTNGVLMTFGNDPRQIPEGKAVIAKFRASGFEPEG-YTLYSYASIQAIAAAFNATGGKD 325
               G+L+T      Q P  KA++   +A   +P G Y   +YA++Q++A A   +    
Sbjct: 243 --AEGMLVTMPKRYDQDPANKAIVEALKADKKDPSGPYVWITYAAVQSLATAMTRSASHA 300

Query: 326 SAKASEWLKSHDVDTVMGKKAWDKKGDLKVSDYVVYQWDDKG 367
                + LK++  DTV+G   WD+KGDLK  ++ V+QW   G
Sbjct: 301 PLDLVKDLKANGADTVIGPLKWDEKGDLKGFEFGVFQWHADG 342