Pairwise Alignments

Query, 428 a.a., high-affinity branched-chain amino acid ABC transporter permease LivM from Serratia liquefaciens MT49

Subject, 361 a.a., Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  238 bits (607), Expect = 2e-67
 Identities = 150/350 (42%), Positives = 207/350 (59%), Gaps = 49/350 (14%)

Query: 101 IIPLMAVIALLFPFV----ATKYLLTVAILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYA 156
           I  + A   LL P +     +   + +  + L+YVLL LGLNIVVG AGLLDLGY+AF+A
Sbjct: 11  IFLIAAAALLLLPIILQSTGSNSWVRIVDIALMYVLLALGLNIVVGYAGLLDLGYIAFFA 70

Query: 157 IGAYGLAL-GYQYLGLGF---------------WAMLPLGALMAALAGALLGFPVLRMHG 200
           +GAY  AL G  +L   F               W ++ L A +A + G +LG P L++ G
Sbjct: 71  VGAYVFALLGSPHLADTFPAIKAMFPNGLHYNIWLVMILAAAVAGVVGMILGAPTLKLRG 130

Query: 201 DYLAIVTLGFGEIIRLVLNNW---MSLTGGPNGVS-VPAPTIFGLEFGRRAKDGGVPIHE 256
           DYLAI+TLGFGEIIR+ L N    +++T GP G+S +   ++FGL+ G+R   G    + 
Sbjct: 131 DYLAIITLGFGEIIRIFLLNMDRPLNITNGPKGISQIDTISVFGLDLGKRLTIGD---YT 187

Query: 257 FLGITYNPNLKFIFIYAVLFLVVLLVLYIKHRLTRMPIGRAWEALREDEIACRSLGLNHV 316
           F  +T       ++ Y  LF VVL ++ I +RL    IGRAW A+REDEIA +++GLN  
Sbjct: 188 FQPVT-------LYYYLFLFFVVLAIV-ISYRLQDSRIGRAWMAIREDEIAAKAMGLNTR 239

Query: 317 LVKLSAFMMGASTAGLAGVFFATYQGFVNPTSFTFFESALILAIVVLGGMGSTIGVVLAA 376
            +KL AF MGAS  G++GV FA++Q FV+P SF+  ES +++A+VVLGG+G   GVVL A
Sbjct: 240 NLKLLAFGMGASFGGVSGVLFASFQRFVSPESFSLMESVMVVAMVVLGGIGHIPGVVLGA 299

Query: 377 FVLTVAPELLRSFAE--------------YRVLLFGVLMVAMMIWRPRGL 412
            +L   PE+LR  A                R LL  + MV +M+ RPRGL
Sbjct: 300 LLLAGLPEVLRHVAHPLTELTGGRLGPEILRQLLIALAMVIVMLLRPRGL 349