Pairwise Alignments

Query, 428 a.a., high-affinity branched-chain amino acid ABC transporter permease LivM from Serratia liquefaciens MT49

Subject, 425 a.a., Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  368 bits (944), Expect = e-106
 Identities = 187/325 (57%), Positives = 242/325 (74%), Gaps = 2/325 (0%)

Query: 105 MAVIALLFPFVATKYLLTVAILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLAL 164
           + VIA+ +PF+ ++  + +A + +IY++LGLGLN+VVGL+GLL LGY  FYAIGAY  AL
Sbjct: 96  LLVIAVAWPFMVSRGSVDIATMTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFAL 155

Query: 165 GYQYLGLGFWAMLPLGALMAALAGALLGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWMSL 224
              Y GLGFW  LPL  L++A AG LLGFPVLR+ GDYLAIVTLGFGEI+R++L N   +
Sbjct: 156 LNHYYGLGFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEI 215

Query: 225 TGGPNGVS-VPAPTIFGLEFGRRAKDGGVP-IHEFLGITYNPNLKFIFIYAVLFLVVLLV 282
           TGGPNG+S +P PT+FGLEF R  ++GG      F G+ Y+P+ + IF+Y V  L+V+L 
Sbjct: 216 TGGPNGISQIPKPTLFGLEFSRSTREGGWDTFSNFFGVKYDPSDRVIFLYLVALLLVVLS 275

Query: 283 LYIKHRLTRMPIGRAWEALREDEIACRSLGLNHVLVKLSAFMMGASTAGLAGVFFATYQG 342
           L++ +RL RMP+GRAWEALREDEIACRSLGL+   +KL+AF + A+ AG AG  FA  QG
Sbjct: 276 LFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTLFAARQG 335

Query: 343 FVNPTSFTFFESALILAIVVLGGMGSTIGVVLAAFVLTVAPELLRSFAEYRVLLFGVLMV 402
           FV+P SFTF ESA +LAIVVLGGMGS   V+LAA +L V+ EL+R F EY +L+ G LMV
Sbjct: 336 FVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDFNEYSMLMLGGLMV 395

Query: 403 AMMIWRPRGLVRISRTSFAPRKGVA 427
            MMIWRP+GL+ ++R     + G A
Sbjct: 396 LMMIWRPQGLLPMTRPQLKLKSGQA 420