Pairwise Alignments

Query, 454 a.a., MFS transporter from Serratia liquefaciens MT49

Subject, 454 a.a., D-galacturonate transporter (MFS superfamily) (from data) from Pseudomonas simiae WCS417

 Score =  339 bits (870), Expect = 1e-97
 Identities = 171/439 (38%), Positives = 257/439 (58%), Gaps = 8/439 (1%)

Query: 2   KATKSRFFILSLLFIVTAINYMDRANLSVAGSKIQSEFDLSATQLGLLFSMFTWFYAASQ 61
           K T  R+ IL +LF+VT INY DRA +++AGS +Q +  + A  LG +FS F W Y A Q
Sbjct: 5   KPTHVRYLILLMLFLVTTINYADRATIAIAGSSLQKDLGIDAVTLGYIFSAFGWAYVAGQ 64

Query: 62  IPVGYVLDRIGSRILYGSAIILWSVFTFLMGFASHHLFATATASFLMLLACRALIGIAEA 121
           IP G++LDR GS+ +Y  +I  WS+FT L G+      +TA  +  ML   R ++G+AEA
Sbjct: 65  IPGGWLLDRFGSKKVYALSIFTWSLFTVLQGYVGEFGVSTAVVALFML---RFMVGLAEA 121

Query: 122 PSFPSNTKIIASWFPDHERARATAIYSSAQYIGLALLTPALSYVVAEYGWEMSFYLSGGV 181
           PSFP N +I+A+WFP  ER  A+AI++SAQY    L  P + ++V  +GW+  F + G +
Sbjct: 122 PSFPGNARIVAAWFPTAERGTASAIFNSAQYFATVLFAPLMGWIVYSFGWQHVFIVMGVI 181

Query: 182 GILFGIYWLLKYRDPQHSNSTNQQELDYIREGGGY----GSKNQASVSEKVRWRDIAFFL 237
           GI+F + WL     P+     N+ E ++I   G        K +   ++  +W  I   L
Sbjct: 182 GIIFSLIWLKVIHSPRQHPMINEAEFNHIAANGAMVDMDQDKGKGKKTDGPKWDYIRQLL 241

Query: 238 KNRTIWGLFIAQFACSSTLYFFLTWFIVYLEKGLHLPIAKAGLGASFPYLMAMAGVLCGG 297
            NR + G+++ Q+  +   YFFLTWF VYL +   + I KAG  AS P +    G + GG
Sbjct: 242 TNRMMLGVYLGQYCINGITYFFLTWFPVYLVQDRGMTILKAGFIASLPAICGFIGGVLGG 301

Query: 298 TLSDMLLKKGKSRTFARKLPVMSGLCLTMIICLVNFFEDQPVIAIAILSVAFFANAFSNL 357
            +SD LL+KG S TFARK P++ GL ++  I   N+ + + ++ +  +++AFF      L
Sbjct: 302 VISDYLLRKGHSLTFARKAPIIGGLLISSSIVACNYVDIEWMV-VGFMALAFFGKGVGAL 360

Query: 358 GWVVWSDVIPRNFIGTMGGCLNICGNLSGIVSPIVIGVILQRTNNFHYAMWYIAAVALLG 417
           GW V SD  P+   G  GG  N  GNL+ I +PIVIG I+  T +F +A+ ++ A AL+ 
Sbjct: 361 GWAVVSDTSPKQIAGLSGGLFNTFGNLASITTPIVIGYIISTTGSFKWALVFVGANALVA 420

Query: 418 LLAYTFLVGKIEVIVPPKP 436
           + +Y  +VG I+ +V  +P
Sbjct: 421 VFSYLVIVGPIKRVVLKEP 439