Pairwise Alignments

Query, 549 a.a., flagellar hook-associated protein FlgK from Serratia liquefaciens MT49

Subject, 681 a.a., flagellar hook protein FlgK from Pseudomonas simiae WCS417

 Score =  254 bits (650), Expect = 6e-72
 Identities = 158/448 (35%), Positives = 241/448 (53%), Gaps = 17/448 (3%)

Query: 4   SLINTAMSGLNAAQVALSTVSNNISNYNVAGYNRQTAILAQNGGMSTMSGFIGNGVTVTS 63
           SL++  MSGLNA+Q ALS +SNNI+N N +GY+RQ    + +        FIG+G T+  
Sbjct: 2   SLLSIGMSGLNASQGALSVLSNNIANANTSGYSRQQTTQSASASNPYGGVFIGSGTTLAD 61

Query: 64  VNREYNQFITNQLRGAQSQAGAQNAYFEKISQIDNLLASKTNTLSTNMQDFFSNLENLVS 123
           V R YN+F+    + + +      AY  + S ID  L+ KT  +S+ +  FF+ ++   +
Sbjct: 62  VRRVYNEFLDAAYQNSTALNNDAKAYSSQASAIDKTLSDKTTGMSSVLSAFFAAVQTSAA 121

Query: 124 NAGDDAARQTVLGKANGLVNQFNNTDKYLRDMDSGVNQQLSDSANQINSYSQQIAKLNDE 183
           N  D +ARQ +L  A  L N+FN+    L      +N QL   ++Q+N  +  IA LN +
Sbjct: 122 NPSDVSARQVLLTSAQTLSNRFNSISTQLNQQKESINGQLKTMSDQVNQLTSSIASLNKQ 181

Query: 184 ITRLRGSGGE-PNALLDQRDQLVTELNQVVGVQVMQQDGDAYTVSFANGLTLVQGSNAYQ 242
           IT+ +GS    P  LLD R++ V  LN++VGV  ++++G  ++VS   G +LV G  +  
Sbjct: 182 ITQAQGSSNSAPANLLDARNEAVRSLNELVGVTAVEKNG-VFSVSTGTGQSLVLGDQSNS 240

Query: 243 VEAVPSNGDPARLTIGYNRGNGVSEVPEGQITSGSVSGVLKFRSESLDSARNQLGQLALA 302
           + AVPS+ DP++ TI  N G G S      ++ GS+ G+L++RS+ L  A N LG++A+ 
Sbjct: 241 ISAVPSSSDPSQYTIQLNAGGGTSVDMGNVLSGGSIGGLLRYRSDVLMPAINDLGRIAIV 300

Query: 303 MADSFNQQHRAGFDLNGDAGTDFF-------SFGGGRVVDNSRNAGDAALSVSYTDTSKV 355
            AD+ N Q   G DLNGD G+  F       +     V     +AG   L+V+ +DTSK+
Sbjct: 301 TADTINSQLGQGVDLNGDFGSSLFKDINSAAAIAQRSVGAAGNSAGSGNLNVTISDTSKL 360

Query: 356 KANDYRVEF-DGSNWQVSRLPDNVKVNATAGVDATTGKPTLSFDGLKVDIDGTA--QKND 412
              DY+V F  G+N+ V R         + G   TT  P    DG  + +DG       D
Sbjct: 361 TPYDYKVTFTSGNNYTVMR-----SDGKSMGAFDTTTTPPPVIDGFTLALDGKGPMAAGD 415

Query: 413 SFTVKPVSDVAGSLKVAITDSANIAAAG 440
           SF V P ++ A ++   + D+  IA AG
Sbjct: 416 SFKVSPTANGATNIGTDLKDANKIAFAG 443



 Score = 83.2 bits (204), Expect = 3e-20
 Identities = 45/110 (40%), Positives = 66/110 (60%), Gaps = 6/110 (5%)

Query: 444 SGRGDNENAKKLLDLQTKKLVD------GKATFSGAYASMVSSVGNQTASAKVSATSQAN 497
           SG+ DN NA+ LLDLQTK  V       G  +   A + +VS+VG + AS     T+   
Sbjct: 570 SGKSDNRNAQALLDLQTKATVGLADGSGGGVSLVAANSRLVSTVGAKAASGITDTTATGA 629

Query: 498 IVKQLTIQQQSISGVNLDEEYGELLRFQQYYMANAQVIQTASSMFDALLN 547
           ++K     + S+S VNLDEE G++++FQQYY A++Q+I+ A   F  L+N
Sbjct: 630 LLKANQDARNSVSQVNLDEEAGDMIKFQQYYTASSQIIKAAQETFSTLIN 679