Pairwise Alignments

Query, 549 a.a., flagellar hook-associated protein FlgK from Serratia liquefaciens MT49

Subject, 547 a.a., flagellar hook-filament junction protein 1 from Escherichia coli BL21

 Score =  605 bits (1559), Expect = e-177
 Identities = 312/551 (56%), Positives = 405/551 (73%), Gaps = 9/551 (1%)

Query: 3   NSLINTAMSGLNAAQVALSTVSNNISNYNVAGYNRQTAILAQNGGMSTMSGFIGNGVTVT 62
           +SLIN AMSGLNAAQ AL+T SNNIS+YNVAGY RQT I+AQ        G++GNGV V+
Sbjct: 2   SSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYVS 61

Query: 63  SVNREYNQFITNQLRGAQSQAGAQNAYFEKISQIDNLLASKTNTLSTNMQDFFSNLENLV 122
            V REY+ FITNQLR AQ+Q+    A +E++S+IDN+L++ T++L+T MQDFF++L+ LV
Sbjct: 62  GVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQMQDFFTSLQTLV 121

Query: 123 SNAGDDAARQTVLGKANGLVNQFNNTDKYLRDMDSGVNQQLSDSANQINSYSQQIAKLND 182
           SNA D AARQ ++GK+ GLVNQF  TD+YLRD D  VN  +  S +QIN+Y++QIA LND
Sbjct: 122 SNAEDPAARQALIGKSEGLVNQFKTTDQYLRDQDKQVNIAIGASVDQINNYAKQIASLND 181

Query: 183 EITRLR--GSGGEPNALLDQRDQLVTELNQVVGVQVMQQDGDAYTVSFANGLTLVQGSNA 240
           +I+RL   G+G  PN LLDQRDQLV+ELNQ+VGV+V  QDG  Y ++ ANG +LVQGS A
Sbjct: 182 QISRLTGVGAGASPNNLLDQRDQLVSELNQIVGVEVSVQDGGTYNITMANGYSLVQGSTA 241

Query: 241 YQVEAVPSNGDPARLTIGYNRGN-GVSEVPEGQITSGSVSGVLKFRSESLDSARNQLGQL 299
            Q+ AVPS+ DP+R T+ Y  G  G  E+PE  + +GS+ G+L FRS+ LD  RN LGQL
Sbjct: 242 RQLAAVPSSADPSRTTVAYVDGTAGNIEIPEKLLNTGSLGGILTFRSQDLDQTRNTLGQL 301

Query: 300 ALAMADSFNQQHRAGFDLNGDAGTDFFSFGGGRVVDNSRNAGDAALSVSYTDTSKVKAND 359
           ALA A++FN QH+AGFD NGDAG DFF+ G   V+ N++N GD A+  + TD S V A D
Sbjct: 302 ALAFAEAFNTQHKAGFDANGDAGEDFFAIGKPAVLQNTKNKGDVAIGATVTDASAVLATD 361

Query: 360 YRVEFDGSNWQVSRLPDNVKVNATAGVDATTGKPTLSFDGLKVDIDGTAQKNDSFTVKPV 419
           Y++ FD + WQV+RL  N     T   +   GK  ++FDGL++   GT   NDSFT+KPV
Sbjct: 362 YKISFDNNQWQVTRLASNTTFTVTPDAN---GK--VAFDGLELTFTGTPAVNDSFTLKPV 416

Query: 420 SDVAGSLKVAITDSANIAAAGKDDSGRGDNENAKKLLDLQT-KKLVDGKATFSGAYASMV 478
           SD   ++ V ITD A IA A ++D+G  DN N + LLDLQ+  K V G  +F+ AYAS+V
Sbjct: 417 SDAIVNMDVLITDEAKIAMASEEDAGDSDNRNGQALLDLQSNSKTVGGAKSFNDAYASLV 476

Query: 479 SSVGNQTASAKVSATSQANIVKQLTIQQQSISGVNLDEEYGELLRFQQYYMANAQVIQTA 538
           S +GN+TA+ K S+T+Q N+V QL+ QQQSISGVNLDEEYG L RFQQYY+ANAQV+QTA
Sbjct: 477 SDIGNKTATLKTSSTTQGNVVTQLSNQQQSISGVNLDEEYGNLQRFQQYYLANAQVLQTA 536

Query: 539 SSMFDALLNIR 549
           +++FDAL+NIR
Sbjct: 537 NAIFDALINIR 547