Pairwise Alignments

Query, 260 a.a., flagellar type III secretion system protein FliR from Serratia liquefaciens MT49

Subject, 258 a.a., Flagellar biosynthetic protein fliR from Pseudomonas putida KT2440

 Score =  167 bits (422), Expect = 3e-46
 Identities = 82/229 (35%), Positives = 139/229 (60%), Gaps = 6/229 (2%)

Query: 1   MLTFDSAQFGVWLSQYFWPLLRILALISTAPVFSEKQISKKVKIGLGGLIVILIAPGLPT 60
           ML     Q G W++ +  PL R+ A++ T P+F  + +  ++++ +   + ++I P LP 
Sbjct: 1   MLELTDTQIGTWVATFILPLFRVTAVLMTMPIFGTRMLPARIRLYVAVAVTVVIVPALPP 60

Query: 61  STVPIF---SAAGLWLAAQQILIGVALGLTMQFAFAAIRLAGEVIGMQMGLSFATFFDPS 117
             +P F   S  G+ L A+QI++G   GL +Q  F A  +AG+++ +QMG++FA+  DP+
Sbjct: 61  --LPEFDPLSLRGMLLCAEQIIVGALFGLALQLLFQAFVVAGQIVAVQMGMAFASMVDPA 118

Query: 118 GGPNMPVLARLLNLLAMLLFLSFNGHLWLISLLVDSFHTLPIQAEPLNGNGFLALTQAGS 177
            G N+ V+++ + +L  +LFL  NGHL +  +L +SF TLP+    L  N F  L     
Sbjct: 119 NGVNVTVISQFMTMLVSVLFLLMNGHLVVFEVLTESFTTLPV-GSALVVNHFWELAGRMG 177

Query: 178 LIFINGMMLALPLICLLLTLNMALGLLNRMTPQLSVFVIGFPVTMTIGI 226
            +F  G++L LP+I  LL +N+A G++ R  PQL++F IGFP+T+ +G+
Sbjct: 178 WVFGAGLLLILPVIAALLVVNIAFGVMTRAAPQLNIFSIGFPLTLVMGM 226